Destabilization of the human epigenome: consequences of foreign DNA insertions

Stable DNA Methylation Boundaries and Expanded Trinucleotide Repeats: Role of DNA Insertions

(2014) Anja Naumann et al.   JOURNAL OF MOLECULAR BIOLOGY

Genome-Wide DNA Methylation as an Epigenetic Consequence of Epstein-Barr Virus Infection of Immortalized Keratinocytes

(2014) C. E. Birdwell et al.   JOURNAL OF VIROLOGY

A promoter-level mammalian expression atlas

(2014)   NATURE

Small RNAs with big implications: new insights into H/ACA snoRNA function and their role in human disease

(2014) Mary McMahon et al.   Wiley Interdisciplinary Reviews-RNA

Chromatin Position Effects Assayed by Thousands of Reporters Integrated in Parallel

(2013) Waseem Akhtar et al.   CELL

Discovery of cross-reactive probes and polymorphic CpGs in the Illumina Infinium HumanMethylation450 microarray

(2013) Yi-an Chen et al.   Epigenetics

An integrated encyclopedia of DNA elements in the human genome

(2012)   NATURE

Impact of foreign DNA integration on tumor biology and on evolution via epigenetic alterations

(2012) Walter Doerfler   Epigenomics

Complete pipeline for Infinium® Human Methylation 450K BeadChip data processing using subset quantile normalization for accurate DNA methylation estimation

(2012) Nizar Touleimat et al.   Epigenomics

Epigenetic consequences of foreign DNA insertions: de novo methylation and global alterations of methylation patterns in recipient genomes

(2011) Walter Doerfler   REVIEWS IN MEDICAL VIROLOGY

Changes in the topology of gene expression networks by human immunodeficiency virus type 1 (HIV-1) integration in macrophages

(2011) María Juliana Soto-Girón et al.   VIRUS RESEARCH

A Distinct DNA-Methylation Boundary in the 5′- Upstream Sequence of the FMR1 Promoter Binds Nuclear Proteins and Is Lost in Fragile X Syndrome

(2009) Anja Naumann et al.   AMERICAN JOURNAL OF HUMAN GENETICS

EBV transformation and cell culturing destabilizes DNA methylation in human lymphoblastoid cell lines

(2009) D. Grafodatskaya et al.   GENOMICS

Differential methylation of tissue- and cancer-specific CpG island shores distinguishes human induced pluripotent stem cells, embryonic stem cells and fibroblasts

(2009) Akiko Doi et al.   NATURE GENETICS