ADMIRE: analysis and visualization of differential methylation in genomic regions using the Infinium HumanMethylation450 Assay

MIRPIPE: quantification of microRNAs in niche model organisms

(2014) Carsten Kuenne et al.   BIOINFORMATICS

Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays

(2014) Martin J. Aryee et al.   BIOINFORMATICS

Emerging Directions in the Genetics of Atrial Fibrillation

(2014) Nathan R. Tucker et al.   CIRCULATION RESEARCH

Epigenetic Regulation of Pluripotency and Differentiation

(2014) Michael J. Boland et al.   CIRCULATION RESEARCH

Systems-level regulation of microRNA networks by miR-130/301 promotes pulmonary hypertension

(2014) Thomas Bertero et al.   JOURNAL OF CLINICAL INVESTIGATION

Comprehensive analysis of DNA methylation data with RnBeads

(2014) Yassen Assenov et al.   NATURE METHODS

Pitx2-microRNA pathway that delimits sinoatrial node development and inhibits predisposition to atrial fibrillation

(2014) J. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

ChAMP: 450k Chip Analysis Methylation Pipeline

(2013) Tiffany J. Morris et al.   BIOINFORMATICS

Epigenome-wide association data implicate DNA methylation as an intermediary of genetic risk in rheumatoid arthritis

(2013) Yun Liu et al.   NATURE BIOTECHNOLOGY

Recommendations for the design and analysis of epigenome-wide association studies

(2013) Karin B Michels et al.   NATURE METHODS

COHCAP: an integrative genomic pipeline for single-nucleotide resolution DNA methylation analysis

(2013) Charles D. Warden et al.   NUCLEIC ACIDS RESEARCH

SNP rs3825214 in TBX5 Is Associated with Lone Atrial Fibrillation in Chinese Han Population

(2013) Xiaobiao Zang et al.   PLoS One

Comb-p: software for combining, analyzing, grouping and correcting spatially correlated P-values

(2012) B. S. Pedersen et al.   BIOINFORMATICS

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

(2012) H. Thorvaldsdottir et al.   BRIEFINGS IN BIOINFORMATICS

MethLAB: A graphical user interface package for the analysis of array-based DNA methylation data

(2012) Varun Kilaru et al.   Epigenetics

GENCODE: The reference human genome annotation for The ENCODE Project

(2012) J. Harrow et al.   GENOME RESEARCH

Analysing and interpreting DNA methylation data

(2012) Christoph Bock   NATURE REVIEWS GENETICS

Hox genes define distinct progenitor sub-domains within the second heart field

(2011) Nicolas Bertrand et al.   DEVELOPMENTAL BIOLOGY

High density DNA methylation array with single CpG site resolution

(2011) Marina Bibikova et al.   GENOMICS

DNA methylation as a universal biomarker

(2010) Victor V Levenson   EXPERT REVIEW OF MOLECULAR DIAGNOSTICS

Pitx2 prevents susceptibility to atrial arrhythmias by inhibiting left-sided pacemaker specification

(2010) J. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

(2010) Jeremy Goecks et al.   GENOME BIOLOGY

GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists

(2009) Eran Eden et al.   BMC BIOINFORMATICS