Whole genome sequencing of Oryza sativa L. cv. Seeragasamba identifies a new fragrance allele in rice

Thirty-three years of 2-acetyl-1-pyrroline, a principal basmati aroma compound in scented rice (Oryza sativaL.): a status review

(2016) Kantilal Wakte et al.   JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE

Rice SNP-seek database update: new SNPs, indels, and queries

(2016) Locedie Mansueto et al.   NUCLEIC ACIDS RESEARCH

Discovery of a novel fragrant allele and development of functional markers for fragrance in rice

(2015) Qiang He et al.   MOLECULAR BREEDING

Genetic Diversity and Population Structure in Aromatic and Quality Rice (Oryza sativa L.) Landraces from North-Eastern India

(2015) Somnath Roy et al.   PLoS One

Genetic polymorphisms in Japanese fragrant landraces and novel fragrant allele domesticated in northern Japan

(2014) Kenta Ootsuka et al.   BREEDING SCIENCE

SNP-Seek database of SNPs derived from 3000 rice genomes

(2014) Nickolai Alexandrov et al.   NUCLEIC ACIDS RESEARCH

The 3,000 rice genomes project

(2014)   GigaScience

Discovery of a new fragrance allele and development of functional markers for identifying diverse fragrant genotypes in rice

(2013) Yaqiong Shi et al.   MOLECULAR BREEDING

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff

(2012) Pablo Cingolani et al.   FLY

Haplotype variation at Badh2, the gene determining fragrance in rice

(2012) Gaoneng Shao et al.   GENOMICS

A new deletion mutation of fragrant gene and the development of three molecular markers for fragrance in rice

(2010) G. N. Shao et al.   PLANT BREEDING

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Development of a simple functional marker for fragrance in rice and its validation in Indian Basmati and non-Basmati fragrant rice varieties

(2009) K. Sakthivel et al.   MOLECULAR BREEDING

The origin and evolution of fragrance in rice (Oryza sativa L.)

(2009) M. J. Kovach et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Discovery of a new fragrance allele and the development of functional markers for the breeding of fragrant rice varieties

(2008) Weiwei Shi et al.   MOLECULAR BREEDING

A Genome-Wide Transcription Analysis Reveals a Close Correlation of Promoter INDEL Polymorphism and Heterotic Gene Expression in Rice Hybrids

(2008) Hui-Yong Zhang et al.   Molecular Plant

Inactivation of an aminoaldehyde dehydrogenase is responsible for fragrance in rice

(2008) Louis M. T. Bradbury et al.   PLANT MOLECULAR BIOLOGY