Biofilm imaging in porous media by laboratory X-Ray tomography: Combining a non-destructive contrast agent with propagation-based phase-contrast imaging tools

Biofilm growth in porous media: Experiments, computational modeling at the porescale, and upscaling

(2016) Malgorzata Peszynska et al.   ADVANCES IN WATER RESOURCES

Development and evaluation of an experimental protocol for 3-D visualization and characterization of the structure of bacterial biofilms in porous media using laboratory X-ray tomography

(2016) Tomislav Ivankovic et al.   BIOFOULING

Time-resolved biofilm deformation measurements using optical coherence tomography

(2015) Florian Blauert et al.   BIOTECHNOLOGY AND BIOENGINEERING

Biodegradation: Updating the Concepts of Control for Microbial Cleanup in Contaminated Aquifers

(2015) Rainer U. Meckenstock et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Intermittent Lagrangian velocities and accelerations in three-dimensional porous medium flow

(2015) M. Holzner et al.   PHYSICAL REVIEW E

Impact of biofilm-induced heterogeneities on solute transport in porous media

(2014) T. Kone et al.   WATER RESOURCES RESEARCH

Arsenic Bioremediation by Biogenic Iron Oxides and Sulfides

(2013) E. O. Omoregie et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Application of synchrotron X-ray microtomography for visualizing bacterial biofilms 3D microstructure in porous media

(2013) S. Rolland du Roscoat et al.   BIOTECHNOLOGY AND BIOENGINEERING

Microbial CaCO3 mineral formation and stability in an experimentally simulated high pressure saline aquifer with supercritical CO2

(2013) Andrew C. Mitchell et al.   International Journal of Greenhouse Gas Control

Bioremediation of an Iron-Rich Mine Effluent byLemna minor

(2013) S. Teixeira et al.   INTERNATIONAL JOURNAL OF PHYTOREMEDIATION

X-ray imaging and analysis techniques for quantifying pore-scale structure and processes in subsurface porous medium systems

(2012) Dorthe Wildenschild et al.   ADVANCES IN WATER RESOURCES

Permeability of a growing biofilm in a porous media fluid flow analyzed by magnetic resonance displacement-relaxation correlations

(2012) Sarah J. Vogt et al.   BIOTECHNOLOGY AND BIOENGINEERING

Transparent Soil for Imaging the Rhizosphere

(2012) Helen Downie et al.   PLoS One

Predation influences the structure of biofilm developed on ultrafiltration membranes

(2012) Nicolas Derlon et al.   WATER RESEARCH

Phase retrieval in X-ray phase-contrast imaging suitable for tomography

(2011) Anna Burvall et al.   OPTICS EXPRESS

Interface-specific x-ray phase retrieval tomography of complex biological organs

(2011) M A Beltran et al.   PHYSICS IN MEDICINE AND BIOLOGY

Imaging biofilm architecture within porous media using synchrotron-based X-ray computed microtomography

(2011) Gabriel C. Iltis et al.   WATER RESOURCES RESEARCH

Upscaling of transport processes in porous media with biofilms in non-equilibrium conditions

(2010) Laurent Orgogozo et al.   ADVANCES IN WATER RESOURCES

Modelling biofilm growth in the presence of carbon dioxide and water flow in the subsurface

(2010) Anozie Ebigbo et al.   ADVANCES IN WATER RESOURCES

Modeling non-equilibrium mass transport in biologically reactive porous media

(2010) Yohan Davit et al.   ADVANCES IN WATER RESOURCES

Online assessment of biofilm development, sloughing and forced detachment in tube reactor by means of magnetic resonance microscopy

(2010) Michael Wagner et al.   BIOTECHNOLOGY AND BIOENGINEERING

Investigation of the mesoscale structure and volumetric features of biofilms using optical coherence tomography

(2010) Michael Wagner et al.   BIOTECHNOLOGY AND BIOENGINEERING

Phase retrieval tomography in the presence of noise

(2010) B. D. Arhatari et al.   JOURNAL OF APPLIED PHYSICS

Imaging biofilm in porous media using X-ray computed microtomography

(2010) Y. DAVIT et al.   JOURNAL OF MICROSCOPY

Laminar flow around corners triggers the formation of biofilm streamers

(2010) R. Rusconi et al.   Journal of the Royal Society Interface

Theoretical modeling of fluid flow in cellular biological media: An overview

(2010) George E. Kapellos et al.   MATHEMATICAL BIOSCIENCES

2D and 3D X-ray phase retrieval of
multi-material objects using a
single defocus distance

(2010) M.A. Beltran et al.   OPTICS EXPRESS

Three-dimensional simulations of biofilm growth in porous media

(2009) D. A. Graf von der Schulenburg et al.   AICHE JOURNAL

Towards optimum permeability reduction in porous media using biofilm growth simulations

(2009) T.R.R. Pintelon et al.   BIOTECHNOLOGY AND BIOENGINEERING

Influence of cement type on ITZ porosity and chloride resistance of self-compacting concrete

(2009) Andreas Leemann et al.   CEMENT & CONCRETE COMPOSITES

Influence of abrasion on biofilm detachment: evidence for stratification of the biofilm

(2009) Alice Rochex et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Biofilms in porous media: Development of macroscopic transport equations via volume averaging with closure for local mass equilibrium conditions

(2008) Fabrice Golfier et al.   ADVANCES IN WATER RESOURCES

Non-invasive mass transfer measurements in complex biofilm-coated structures

(2008) D.A. Graf von der Schulenburg et al.   BIOTECHNOLOGY AND BIOENGINEERING

Analyzing characteristic length scales in biofilm structures

(2008) K. Milferstedt et al.   BIOTECHNOLOGY AND BIOENGINEERING

Microbial biodiversity in groundwater ecosystems

(2008) C. GRIEBLER et al.   FRESHWATER BIOLOGY

The binary dissector: phase contrast tomography of two- and three-material objects from few projections

(2008) G. R. Myers et al.   OPTICS EXPRESS

Stratification in the cohesion of biofilms grown under various environmental conditions

(2007) Nicolas Derlon et al.   WATER RESEARCH