Comparison of HLA allelic imputation programs

HLA imputation in an admixed population: An assessment of the 1000 Genomes data as a training set

(2016) Kelly Nunes et al.   HUMAN IMMUNOLOGY

Construction of a population-specific HLA imputation reference panel and its application to Graves' disease risk in Japanese

(2015) Yukinori Okada et al.   NATURE GENETICS

High-accuracy imputation for HLA class I and II genes based on high-resolution SNP data of population-specific references

(2015) S-S Khor et al.   PHARMACOGENOMICS JOURNAL

A genome-wide association study of heparin-induced thrombocyto - penia using an electronic medical record

(2015) Jason H. Karnes et al.   THROMBOSIS AND HAEMOSTASIS

Major histocompatibility complex associations of ankylosing spondylitis are complex and involve further epistasis with ERAP1

(2015) Adrian Cortes et al.   Nature Communications

Performance of HLA allele prediction methods in African Americans for class II genes HLA-DRB1, −DQB1, and –DPB1

(2014) Albert M Levin et al.   BMC GENETICS

Predicting HLA alleles from high-resolution SNP data in three Southeast Asian populations

(2014) Nisha Esakimuthu Pillai et al.   HUMAN MOLECULAR GENETICS

Illumina human exome genotyping array clustering and quality control

(2014) Yan Guo et al.   Nature Protocols

Biobanks and Electronic Medical Records: Enabling Cost-Effective Research

(2014) E. Bowton et al.   Science Translational Medicine

Evaluation of HLA-DRB1 imputation using a Finnish dataset

(2014) E. Vlachopoulou et al.   TISSUE ANTIGENS

The major histocompatibility complex: a model for understanding graft-versus-host disease

(2013) E. W. Petersdorf   BLOOD

Genetic insights into common pathways and complex relationships among immune-mediated diseases

(2013) Miles Parkes et al.   NATURE REVIEWS GENETICS

HIBAG—HLA genotype imputation with attribute bagging

(2013) X Zheng et al.   PHARMACOGENOMICS JOURNAL

Imputing Amino Acid Polymorphisms in Human Leukocyte Antigens

(2013) Xiaoming Jia et al.   PLoS One

Classical HLA-DRB1 and DPB1 alleles account for HLA associations with primary biliary cirrhosis

(2012) P Invernizzi et al.   GENES AND IMMUNITY

Five amino acids in three HLA proteins explain most of the association between MHC and seropositive rheumatoid arthritis

(2012) Soumya Raychaudhuri et al.   NATURE GENETICS

Role of theMICApolymorphism in systemic lupus erythematosus

(2011) Kohsuke Yoshida et al.   ARTHRITIS AND RHEUMATISM

HLA and Sjögren's syndrome susceptibility. A meta-analysis of worldwide studies

(2011) Paola Cruz-Tapias et al.   AUTOIMMUNITY REVIEWS

HLA*IMP—an integrated framework for imputing classical HLA alleles from SNP genotypes

(2011) Alexander T. Dilthey et al.   BIOINFORMATICS

Pitfalls of merging GWAS data: lessons learned in the eMERGE network and quality control procedures to maintain high data quality

(2011) Rebecca L. Zuvich et al.   GENETIC EPIDEMIOLOGY

Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis

(2011) Stephen Sawcer et al.   NATURE

HLA-B*5701 genotype is a major determinant of drug-induced liver injury due to flucloxacillin

(2009) Ann K Daly et al.   NATURE GENETICS

A Statistical Method for Predicting Classical HLA Alleles from SNP Data

(2008) Stephen Leslie et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Development of a Large-Scale De-Identified DNA Biobank to Enable Personalized Medicine

(2008) DM Roden et al.   CLINICAL PHARMACOLOGY & THERAPEUTICS

HLA-B*5701 Screening for Hypersensitivity to Abacavir

(2008) Simon Mallal et al.   NEW ENGLAND JOURNAL OF MEDICINE