Towards an efficient compression of 3D coordinates of macromolecular structures

Compressing molecular dynamics trajectories: Breaking the one-bit-per-sample barrier

(2016) Jan Huwald et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Quality assessment of protein NMR structures

(2013) Antonio Rosato et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics

(2013) Gongpu Zhao et al.   NATURE

Do we see what we should see? Describing non-covalent interactions in protein structures including precision

(2013) Manickam Gurusaran et al.   IUCrJ

Go hybrid: EM, crystallography, and beyond

(2012) Gabriel C Lander et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Efficient compression of molecular dynamics trajectory files

(2012) Patrick Marais et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Putting the Pieces Together: Integrative Modeling Platform Software for Structure Determination of Macromolecular Assemblies

(2012) Daniel Russel et al.   PLOS BIOLOGY

Trajectory NG: portable, compressed, general molecular dynamics trajectories

(2011) Daniel Spångberg et al.   JOURNAL OF MOLECULAR MODELING

Reduced representation of protein structure: implications on efficiency and scope of detection of structural similarity

(2010) Zong Zhang et al.   BMC BIOINFORMATICS

Integrating Diverse Data for Structure Determination of Macromolecular Assemblies

(2008) Frank Alber et al.   Annual Review of Biochemistry