An Integrative Analysis of Preeclampsia Based on the Construction of an Extended Composite Network Featuring Protein-Protein Physical Interactions and Transcriptional Relationships

Concise Review: Balancing Stem Cell Self-Renewal and Differentiation with PLZF

(2016) Tong Ming Liu et al.   STEM CELLS

DEC1 and DEC2 Crosstalk between Circadian Rhythm and Tumor Progression

(2016) Fuyuki Sato et al.   Journal of Cancer

JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles

(2015) Anthony Mathelier et al.   NUCLEIC ACIDS RESEARCH

Reduced expression of the epidermal growth factor signaling system in preeclampsia

(2015) D.R. Armant et al.   PLACENTA

Increased glucocerebrosidase expression and activity in preeclamptic placenta

(2015) J.M. Jebbink et al.   PLACENTA

Meta-Analysis of Placental Transcriptome Data Identifies a Novel Molecular Pathway Related to Preeclampsia

(2015) Miranda van Uitert et al.   PLoS One

BTB-ZF transcriptional regulator PLZF modifies chromatin to restrain inflammatory signaling programs

(2015) Anthony J. Sadler et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Uncovering disease-disease relationships through the incomplete interactome

(2015) J. Menche et al.   SCIENCE

The acetyltransferase HAT1 moderates the NF-κB response by regulating the transcription factor PLZF

(2015) Anthony J. Sadler et al.   Nature Communications

Correcting for the study bias associated with protein–protein interaction measurements reveals differences between protein degree distributions from different cancer types

(2015) Martin H. Schaefer et al.   Frontiers in Genetics

Loss of PLZF Expression in Prostate Cancer by Immunohistochemistry Correlates with Tumor Aggressiveness and Metastasis

(2015) Guang-Qian Xiao et al.   PLoS One

NLRP7, Involved in Hydatidiform Molar Pregnancy (HYDM1), Interacts with the Transcriptional Repressor ZBTB16

(2015) Heike Singer et al.   PLoS One

A lesson for cancer research: placental microarray gene analysis in preeclampsia

(2015) Frank Louwen et al.   Oncotarget

A Proteome-Scale Map of the Human Interactome Network

(2014) Thomas Rolland et al.   CELL

Pre-eclampsia part 1: current understanding of its pathophysiology

(2014) Tinnakorn Chaiworapongsa et al.   Nature Reviews Nephrology

Modules, networks and systems medicine for understanding disease and aiding diagnosis

(2014) Mika Gustafsson et al.   Genome Medicine

Widespread DNA hypomethylation at gene enhancer regions in placentas associated with early-onset pre-eclampsia

(2013) J. D. Blair et al.   MOLECULAR HUMAN REPRODUCTION

INMEX—a web-based tool for integrative meta-analysis of expression data

(2013) Jianguo Xia et al.   NUCLEIC ACIDS RESEARCH

Up-Regulated Expression and Aberrant DNA Methylation of LEP and SH3PXD2A in Pre-Eclampsia

(2013) Yuqian Xiang et al.   PLoS One

Landscape of Transcriptional Deregulations in the Preeclamptic Placenta

(2013) Daniel Vaiman et al.   PLoS One

Differentially Expressed Genes in the Pre-Eclamptic Placenta: A Systematic Review and Meta-Analysis

(2013) C. Emily Kleinrouweler et al.   PLoS One

Integrative transcriptome analysis reveals dysregulation of canonical cancer molecular pathways in placenta leading to preeclampsia

(2013) Roxana Moslehi et al.   Scientific Reports

Gene interaction enrichment and network analysis to identify dysregulated pathways and their interactions in complex diseases

(2012) Yu Liu et al.   BMC Systems Biology

Preeclampsia: a bioinformatics approach through protein-protein interaction networks analysis

(2012) Eduardo Tejera et al.   BMC Systems Biology

Topological analysis and interactive visualization of biological networks and protein structures

(2012) Nadezhda T Doncheva et al.   Nature Protocols

ENCODE Data in the UCSC Genome Browser: year 5 update

(2012) Kate R. Rosenbloom et al.   NUCLEIC ACIDS RESEARCH

SUMO Modification of Stra13 Is Required for Repression of Cyclin D1 Expression and Cellular Growth Arrest

(2012) Yaju Wang et al.   PLoS One

Human diseases through the lens of network biology

(2012) Laura I. Furlong   TRENDS IN GENETICS

The Promyelocytic Leukemia Zinc Finger Protein: Two Decades of Molecular Oncology

(2012) Bandar Ali Suliman et al.   Frontiers in Oncology

Interactome Networks and Human Disease

(2011) Marc Vidal et al.   CELL

Hypoxia-induced transcriptional repression of the melanoma-associated oncogene MITF

(2011) E. Feige et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparative gene expression profiling of placentas from patients with severe pre-eclampsia and unexplained fetal growth restriction

(2011) Haruki Nishizawa et al.   Reproductive Biology and Endocrinology

TGFβ induces proHB-EGF shedding and EGFR transactivation through ADAM activation in gastric cancer cells

(2010) Masahide Ebi et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

GLay: community structure analysis of biological networks

(2010) G. Su et al.   BIOINFORMATICS

Pre-eclampsia

(2010) Eric AP Steegers et al.   LANCET

Transcriptional profiling of human placentas from pregnancies complicated by preeclampsia reveals disregulation of sialic acid acetylesterase and immune signalling pathways

(2010) S. Tsai et al.   PLACENTA

Differential Placental Gene Expression in Severe Preeclampsia

(2009) V. Sitras et al.   PLACENTA

A comparison of meta-analysis methods for detecting differentially expressed genes in microarray experiments

(2008) Fangxin Hong et al.   BIOINFORMATICS

Membrane-anchored growth factors, the epidermal growth factor family: Beyond receptor ligands

(2008) Shigeki Higashiyama et al.   CANCER SCIENCE

Severe Preeclampsia-Related Changes in Gene Expression at the Maternal-Fetal Interface Include Sialic Acid-Binding Immunoglobulin-Like Lectin-6 and Pappalysin-2

(2008) Virginia D. Winn et al.   ENDOCRINOLOGY

Interaction networks for systems biology

(2008) Samuel Bader et al.   FEBS LETTERS

Protein-protein interaction networks and biology—what's the connection?

(2008) Luke Hakes et al.   NATURE BIOTECHNOLOGY

Stra13/DEC1 and DEC2 inhibit sterol regulatory element binding protein-1c in a hypoxia-inducible factor-dependent mechanism

(2008) Su Mi Choi et al.   NUCLEIC ACIDS RESEARCH

Human mismatch repair gene, MLH1, is transcriptionally repressed by the hypoxia-inducible transcription factors, DEC1 and DEC2

(2008) H Nakamura et al.   ONCOGENE

WikiPathways: Pathway Editing for the People

(2008) Alexander R Pico et al.   PLOS BIOLOGY

Molecular mechanisms of preeclampsia

(2007) Walter P. Mutter et al.   MICROVASCULAR RESEARCH