Genome-Wide Identification and Characterization of MicroRNAs and Target Genes in Lonicera japonica

Identification of Novel and Conserved MicroRNAs Related to Drought Stress in Potato by Deep Sequencing

(2014) Ning Zhang et al.   PLoS One

Identification of miRNAs and their targets from Brassica napus by high-throughput sequencing and degradome analysis

(2012) Miao Y Xu et al.   BMC GENOMICS

Exploiting genes and functional diversity of chlorogenic acid and luteolin biosyntheses in Lonicera japonica and their substitutes

(2012) Yuan Yuan et al.   GENE

High-throughput sequencing discovery of conserved and novel microRNAs in Chinese cabbage (Brassica rapa L. ssp. pekinensis)

(2012) Fengde Wang et al.   MOLECULAR GENETICS AND GENOMICS

Discovery and profiling of novel and conserved microRNAs during flower development in Carya cathayensis via deep sequencing

(2012) Zheng Jia Wang et al.   PLANTA

Characterization of statistical features for plant microRNA prediction

(2011) Vivek Thakur et al.   BMC GENOMICS

miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades

(2011) Marc R. Friedländer et al.   NUCLEIC ACIDS RESEARCH

High-Throughput Sequencing, Characterization and Detection of New and Conserved Cucumber miRNAs

(2011) Germán Martínez et al.   PLoS One

Identification and Characterization of microRNAs from Peanut (Arachis hypogaea L.) by High-Throughput Sequencing

(2011) Xiaoyuan Chi et al.   PLoS One

GenBank

(2010) D. A. Benson et al.   NUCLEIC ACIDS RESEARCH

Transcriptome-wide identification of microRNA targets in rice

(2010) Yong-Fang Li et al.   PLANT JOURNAL

Identification and characterization of microRNAs and their targets in the bioenergy plant switchgrass (Panicum virgatum)

(2010) Fuliang Xie et al.   PLANTA

Small RNAs and Their Roles in Plant Development

(2009) Xuemei Chen   Annual Review of Cell and Developmental Biology

Roles of Plant Small RNAs in Biotic Stress Responses

(2009) Virginia Ruiz-Ferrer et al.   Annual Review of Plant Biology

A Genome-Wide Characterization of MicroRNA Genes in Maize

(2009) Lifang Zhang et al.   PLoS Genetics

SOAP: short oligonucleotide alignment program

(2008) R. Li et al.   BIOINFORMATICS

Identification of novel and candidate miRNAs in rice by high throughput sequencing

(2008) Ramanjulu Sunkar et al.   BMC PLANT BIOLOGY

Computational identification of 48 potato microRNAs and their targets

(2008) Wenwei Zhang et al.   COMPUTATIONAL BIOLOGY AND CHEMISTRY

Big impacts by small RNAs in plant development

(2008) George Chuck et al.   CURRENT OPINION IN PLANT BIOLOGY

Genome-wide identification and evolutionary analysis of the plant specific SBP-box transcription factor family

(2008) An-Yuan Guo et al.   GENE

Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening

(2008) S. Moxon et al.   GENOME RESEARCH

Rfam: updates to the RNA families database

(2008) P. P. Gardner et al.   NUCLEIC ACIDS RESEARCH

Criteria for Annotation of Plant MicroRNAs

(2008) B. C. Meyers et al.   PLANT CELL

Insights into corn genes derived from large-scale cDNA sequencing

(2008) Nickolai N. Alexandrov et al.   PLANT MOLECULAR BIOLOGY

Identification of microRNAs and other small regulatory RNAs using cDNA library sequencing

(2007) Markus Hafner et al.   METHODS