Comparative Genomics and Metabolic Analysis Reveals Peculiar Characteristics of Rhodococcus opacus Strain M213 Particularly for Naphthalene Degradation

IslandViewer 3: more flexible, interactive genomic island discovery, visualization and analysis: Figure 1.

(2015) Bhavjinder K. Dhillon et al.   NUCLEIC ACIDS RESEARCH

The National Library of Medicine’s (NLM) Hazardous Substances Data Bank (HSDB): Background, recent enhancements and future plans

(2014) George Charles Fonger et al.   TOXICOLOGY

Use of whole genome sequences to develop a molecular phylogenetic framework for Rhodococcus fascians and the Rhodococcus genus

(2014) Allison L. Creason et al.   Frontiers in Plant Science

IMG 4 version of the integrated microbial genomes comparative analysis system

(2013) Victor M. Markowitz et al.   NUCLEIC ACIDS RESEARCH

Combination of degradation pathways for naphthalene utilization inRhodococcussp. strain TFB

(2013) Laura Tomás-Gallardo et al.   Microbial Biotechnology

Comparing thousands of circular genomes using the CGView Comparison Tool

(2012) Jason R Grant et al.   BMC GENOMICS

Draft Genome Sequence and Comparative Analysis of the Superb Aromatic-Hydrocarbon Degrader Rhodococcus sp. Strain DK17

(2012) M. Yoo et al.   JOURNAL OF BACTERIOLOGY

Draft Genome Sequence of the Nitrophenol-Degrading Actinomycete Rhodococcus imtechensis RKJ300

(2012) S. Vikram et al.   JOURNAL OF BACTERIOLOGY

Characterization of Gordonia sp. strain CC-NAPH129-6 capable of naphthalene degradation

(2012) Chun-Liang Lin et al.   MICROBIOLOGICAL RESEARCH

The phn Island: A New Genomic Island Encoding Catabolism of Polynuclear Aromatic Hydrocarbons

(2012) William J. Hickey et al.   Frontiers in Microbiology

Complete Genome Sequence of the Polycyclic Aromatic Hydrocarbon-Degrading Bacterium Alteromonas sp. Strain SN2

(2011) H. M. Jin et al.   JOURNAL OF BACTERIOLOGY

Functional characterization of a gene cluster involved in gentisate catabolism in Rhodococcus sp. strain NCIMB 12038

(2010) Ting-Ting Liu et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

A 63 kb genomic resistance island found in a multidrug-resistant Acinetobacter baumannii isolate of European clone I from 1977

(2010) Lenka Krizova et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Degradation of a Mixture of Hydrocarbons, Gasoline, and Diesel Oil Additives by Rhodococcus aetherivorans and Rhodococcus wratislaviensis

(2009) M. Auffret et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

r2cat: synteny plots and comparative assembly

(2009) P. Husemann et al.   BIOINFORMATICS

EDGAR: A software framework for the comparative analysis of prokaryotic genomes

(2009) Jochen Blom et al.   BMC BIOINFORMATICS

Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation

(2009) Kennan Salinero et al.   BMC GENOMICS

The genome ofPolaromonas naphthalenivoransstrain CJ2, isolated from coal tar-contaminated sediment, reveals physiological and metabolic versatility and evolution through extensive horizontal gene transfer

(2009) Jane M. Yagi et al.   ENVIRONMENTAL MICROBIOLOGY

Burkholderia pseudomallei genome plasticity associated with genomic island variation

(2008) Sarinna Tumapa et al.   BMC GENOMICS