Article
Biotechnology & Applied Microbiology
Yao Xiao, Min Chen, Jian Chen, Li-Na Mao, Yi-Ru Peng, Shan-Shan Gui, Bing-Huo Zhang
Summary: A new Gram-stain positive actinobacterial strain, named Microbacterium kunmingensis, was isolated from Lake Kunming in southwest China. This strain showed unique physiological and biochemical characteristics and had the ability to promote the growth of Microcystis aeruginosa, a type of blue-green algae.
JOURNAL OF ANTIBIOTICS
(2022)
Article
Microbiology
Ubiana C. Silva, Sara Cuadros-Orellana, Daliane R. C. Silva, Luiz F. Freitas-Junior, Ana C. Fernandes, Laura R. Leite, Christiane A. Oliveira, Vera L. Dos Santos
Summary: Rock phosphate is a natural source of phosphorus for agriculture, but its slow release can limit short-term availability to crops. P-solubilizing microorganisms were studied for their ability to improve P availability from rock phosphate. Genomic analysis of selected bacteria revealed genes related to P uptake and metabolism, showing potential for use as bioinoculants to improve rock phosphate solubilization and plant growth under field conditions.
FRONTIERS IN MICROBIOLOGY
(2021)
Article
Microbiology
Guang-Xun Du, Ling-Yun Qu, Xu-Guang Hong, Cheng-Hua Li, De -Wen Ding, Ping Gao, Qin- Zeng Xu
Summary: Strain YCWA18(T) is a novel species of the genus Kushneria, characterized by its salt, cold, and alkaline tolerance, as well as unique morphological, growth, and chemical properties. Phylogenetic and genomic analyses further support its distinct taxonomic position.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2021)
Article
Microbiology
Kenza Boubekri, Abdoulaye Soumare, Ilham Mardad, Karim Lyamlouli, Mohamed Hafidi, Yedir Ouhdouch, Lamfeddal Kouisni
Summary: By investigating the solubilization traits of nine Actinobacteria under different fertilization conditions, this study identified four strains that showed promising results in solubilizing potassium, leading to improved growth parameters in wheat. All strains were capable of producing various beneficial substances that significantly enhanced the growth and development of wheat.
Article
Environmental Sciences
Zewen Tan, Xiuyue Yang, Jianpeng Gao, Yongtao Li, Beini Gong
Summary: This study identified Pseudomonas sp. TC952 as a strain with high phosphate-solubilizing ability, even under tetracycline stress. Through genome analysis, the mechanism of TC desorption from inorganic phosphate and the process of organic acid secretion to dissolve inorganic phosphate and siderophore secretion for chelating inorganic phosphate were revealed. The results of this study provide important insights into the migration and transformation route of tetracycline in the environment.
ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH
(2023)
Article
Microbiology
Rui Li, Meng Wang, Zhen Ren, Yang Ji, Min Yin, Hao Zhou, Shu-Kun Tang
Summary: A novel actinobacterium, Amycolatopsis aidingensis, was isolated from a saline soil sample in Xinjiang, China. Strain YIM 96748(T) demonstrated high DNA-DNA relatedness and average nucleotide identity, confirming its status as a new species within the Amycolatopsis genus. Further research on this strain is needed to explore its biosynthetic potential for producing secondary metabolites.
FRONTIERS IN MICROBIOLOGY
(2021)
Article
Microbiology
Kanchana Sitlaothaworn, Pattaraporn Yukphan, Tanakwan Budsabun, Piyanat Charoenyingcharoen, Wongsakorn Phongsopitanun, Ancharida Savarajara, Somboon Tanasupawat
Summary: A novel bacterium, Sx8-5T, was isolated from stem tissue of Kaempferia marginata Carey in Kanchanaburi Province, Thailand. It belongs to the genus Novosphingobium and shares sequence similarities with other species of the genus. The proposed name for this bacterium is Novosphingobium kaempferiae sp. nov.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2023)
Article
Plant Sciences
Qinghua Ma, Shanwen He, Xing Wang, Zed Rengel, Lin Chen, Xinghong Wang, Shunxiang Pei, Xuebing Xin, Xiaoxia Zhang
Summary: This study isolated and characterized phosphate-solubilizing bacteria from the rhizosphere soil of Acer truncatum Bunge and evaluated their effect on the growth of A. truncatum seedlings. One strain showed high phosphate solubilization capacity and significantly improved plant height, trunk diameter, dry weight, and phosphorus accumulation in roots and shoots of A. truncatum seedlings. These findings suggest that the strain could be a potential strategy for improving A. truncatum cultivation.
FRONTIERS IN PLANT SCIENCE
(2023)
Article
Microbiology
Geeta Chhetri, Minchung Kang, Jiyoun Kim, Inhyup Kim, Yoonseop So, Taegun Seo
Summary: Strain KVB23(T) is a facultative anaerobic bacterium isolated from rice plant roots in South Korea, with the ability to solubilize calcium phosphate tribasic and synthesize tryptophan, which may enhance rice plant growth. Through various methods, it was found to represent a novel genus within the Rhodobacteriaceae family, named Fuscibacter oryzae gen. nov., sp. nov.
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
(2021)
Article
Microbiology
Inhyup Kim, Taegun Seo
Summary: A novel bacterial strain RMG13T was isolated from soil in Siheung-si, Republic of Korea. Through polyphasic analysis, it was determined that RMG13T belongs to the genus Pseudarthrobacter and is most closely related to Pseudarthrobacter sulfonivorans ALLT and Pseudarthrobacter psychrotolerans YJ56T. RMG13T exhibits unique phenotypic, genotypic, and chemotaxonomic characteristics, leading to its proposed classification as Pseudarthrobacter humi sp. nov.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2023)
Article
Environmental Sciences
Yi Li, Lijuan Mo, Xiaoqin Zhou, Yawei Yao, Jiangming Ma, Kehui Liu, Fangming Yu
Summary: The study characterized the plant growth-promoting traits of Enterobacter sp. FM-1 and its ability to promote growth, increase IAA, P, and Fe concentrations, and facilitate Cd and Pb phytoremediation in Centella asiatica L. The results showed that FM-1 secreted IAA, produced siderophores, and had P-solubilization ability, even under Cd exposure. Pot experiments confirmed that FM-1 successfully colonized the roots of C. asiatica L., reducing soil pH and increasing bioavailability of Cd and Pb.
ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH
(2022)
Article
Microbiology
Guojiang Niu, Wenjing Wang, Hongmei Mu, Peiqiang Jiang, Xingtao Ren, Jing Li
Summary: A novel Gram-staining-positive, heterotrophic, non-spore-forming, non-motile, rod-shaped strain ZS14-85(T) belonging to the genus Cryobacterium was isolated from soil in Antarctica. It showed growth in 0-2% (w/v) NaCl, at pH 7.0-9.0 (optimum at pH 7.0) and 4-30 celcius (optimum at 20 celcius). Phylogenetic analysis revealed its lineage in the genus Cryobacterium. The proposed species Cryobacterium zhongshanensis sp. nov. had distinct characteristics based on phenotypic, phylogenetic and genotypic data.
ARCHIVES OF MICROBIOLOGY
(2023)
Article
Microbiology
Imen Nouioui, Gabriele Poetter, Marlen Jando, Michael Goodfellow
Summary: A genome-based polyphasic study confirmed a novel species of Nocardia in an actinorhizal root nodule based on genomic analysis and taxonomic characteristics.
ARCHIVES OF MICROBIOLOGY
(2022)
Article
Agricultural Engineering
Hongyun Xu, Jun Lv, Cun Yu
Summary: This study found that co-inoculation with phosphate-solubilizing microorganisms can increase the phosphorus-dissolving ratio of Pinus massoniana, promote its growth, and enhance soil nutrient content. The co-inoculation also affected the diversity of both plant and rhizosphere microbiomes, increasing the abundance of beneficial bacteria and ectomycorrhizal fungi. Transcriptome analysis revealed the impact of co-inoculation on various growth regulatory pathways. This study provides a theoretical basis for the development of compound microbial fertilizers for cultivation and management of Masson pine forests.
INDUSTRIAL CROPS AND PRODUCTS
(2023)
Article
Microbiology
Xue Zhang, Lida Zhang, XiaoYan Yu, Jing Zhang, Yanjie Jiao, Hanxun Ju, Xiangjing Wang, Junwei Zhao, Wensheng Xiang
Summary: The novel actinobacterium strain NEAU-351(T) isolated from cow dung in Heilongjiang Province, China belongs to the genus Nocardia and represents a new species named Nocardia bovistercoris. It exhibits specific characteristics including lipid composition, major menaquinone content, fatty acid profile, and genomic DNA G+C content.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2021)
Article
Geochemistry & Geophysics
Wenjun Li, Jing Wang, Mengmeng Cui, Xia Liu, Lihui Jia, Kaiyun Chen, Shitou Wu, Bingyu Gao, Dingshuai Xue, Yanhong Liu, Chao Li, Yang Luo, Benxun Su
Summary: Two clinopyroxene megacrysts, DMP-2 and DMP-3, from Cenozoic alkali basalts in Hannuoba region of China were characterized for major and trace element compositions through in situ microanalysis. Both clinopyroxene samples showed homogeneity in element mass fractions based on EPMA and LA-ICP-MS analyses. Bulk analyses using XRF, ICP-OES and solution ICP-MS techniques also revealed consistent major and trace element data. Thus, these samples can serve as potential reference materials for elemental in situ microanalysis, with recommended element mass fractions for thirty-two elements.
GEOSTANDARDS AND GEOANALYTICAL RESEARCH
(2023)
Review
Environmental Sciences
Yuanming Zhang, Akash Tariq, Alice C. Hughes, Deyuan Hong, Fuwen Wei, Hang Sun, Jordi Sardans, Josep Penuelas, Gad Perry, Jianfang Qiao, Alishir Kurban, Xiaoxia Jia, Domitilla Raimondo, Borong Pan, Weikang Yang, Daoyuan Zhang, Wenjun Li, Zeeshan Ahmed, Carl Beierkuhnlein, Georgy Lazkov, Kristina Toderich, Shirin Karryeva, Davron Dehkonov, Hikmat Hisoriev, Liliya Dimeyeva, Dmitry Milko, Ahmedou Soule, Malgozhata Suska-Malawska, Jumamurat Saparmuradov, Alilov Bekzod, Paul Allin, Sidy Dieye, Birane Cissse, Wondmagegne Whibesilassie, Keping Ma
Summary: The strategic goals of the United Nations and the Aichi Targets for biodiversity conservation have not been met. Instead, biodiversity has continued to rapidly decrease, especially in developing countries.
SCIENCE OF THE TOTAL ENVIRONMENT
(2023)
Article
Plant Sciences
Guangzhao Jin, Wenjun Li, Feng Song, Lei Yang, Zhibin Wen, Ying Feng
Summary: This study sequenced and compared the chloroplast genomes of 16 species within the subgenus Seriphidium, revealing genetic consistency and variation in the subgenus. It also identified repetitive sequences and highly variable loci, and found inconsistencies between the molecular phylogeny and traditional taxonomy of subgenus Seriphidium. The whole chloroplast genomes can serve as molecular markers to infer interspecific relationships in this taxon.
Article
Microbiology
Chun-Yan Lu, Lei Dong, Shuai Li, Wen-Hui Lian, Zhi-Liang Lin, Zhuo-Huan Zheng, Lei Gao, Bao-Zhu Fang, Wen-Jun Li
Summary: A new actinobacterium, SYSU T00001(T), was isolated from a tidal flat sediment sample from Guangdong province, China. The isolate exhibited unique characteristics and showed highest similarity to Salinibacterium hongtaonis 194(T) based on phylogenetic analyses. Therefore, a novel species of the genus Salinibacterium, Salinibacterium sedimenticola sp. nov., is proposed, with SYSU T00001(T) as the type strain.
CURRENT MICROBIOLOGY
(2023)
Article
Fisheries
Chong Han, Wenwei Huang, Suhan Peng, Jiangwei Zhou, Huawei Zhan, Wenjun Li, Jian Gong, Qiang Li
Summary: In this study, 11 members of IRFs were identified and their expression patterns in different tissues were analyzed in the zig-zag eel. The results provide valuable information for understanding the antibacterial mechanism of IRFs in teleosts.
DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY
(2023)
Article
Substance Abuse
Thomas J. Stopka, Marc R. Larochelle, Xiaona Li, Dana Bernson, Wenjun Li, Leland K. Ackerson, Ric Bayly, Olaf Dammann, Cici Bauer
Summary: The study identified significant variations in fatal overdose rates of opioid-related drugs among different populations and geographical locations. These variations and clusters changed over time, providing valuable information to develop targeted public health strategies for high-risk subpopulations.
DRUG AND ALCOHOL DEPENDENCE
(2023)
Article
Materials Science, Textiles
Wenjun Li, Hui Zhang, Pei Chen, Jiale Yao, Xiangzhi Dong
Summary: In this study, Ag-doped g-C3N4-TiO2 nanocomposite photocatalysts were deposited on cotton fabric surface, significantly improving the photodegradation rate of MO dye under visible light irradiation. The introduction of highly dispersed Ag nanoparticles into g-C3N4-TiO2 composites was found to exhibit excellent photocatalytic properties due to narrowed band gap and faster separation and transfer of charge carriers. The Ag nanoparticle doping site had a significant influence on the photocatalytic activity. Moreover, the modified cotton fabric showed good reusability and stability for MO dye degradation after multiple cycles.
FIBERS AND POLYMERS
(2023)
Article
Microbiology
Dan-Dan Zhang, Xiao-Juan Zhang, Danni Wu, Bin-Bin Li, Hong-Can Liu, Yu-Guang Zhou, Bao-Zhu Fang, Wen-Jun Li, Man Cai
Summary: Two novel strains of bacteria, named XJ19-10T and XJ19-11, were isolated from river water in Xinjiang Uygur Autonomous Region, China. Through phenotypic, genotypic, and chemotaxonomic analysis, it was determined that these strains represent a new species, Aquiflexum gelatinilyticum sp. nov.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2023)
Article
Cell Biology
Yan-Ni Qu, Yang-Zhi Rao, Yan-Ling Qi, Yu-Xian Li, Andrew Li, Marike Palmer, Brian P. Hedlund, Wen-Sheng Shu, Paul N. Evans, Guo-Xing Nie, Zheng-Shuang Huo, Wen-Jun Li
Summary: By reconstructing 10 closely related metagenome-assembled genomes from hot spring habitats, we discovered a new species, Panguiarchaeum symbiosum. Our functional investigations revealed that Panguiarchaeum symbiosum is an anaerobic organism that exclusively grows in thermal habitats by fermenting peptides and producing sulfide and hydrogen. The species likely lives in a symbiotic lifestyle similar to DPANN archaea. Population metagenomics and metatranscriptomic analyses supported the proposed proteolytic catabolism and symbiotic lifestyle of Panguiarchaeum symbiosum. This study provides insights into the metabolism, evolution, and potential symbiotic lifestyle of this unique archaeon within the TACK superphylum.
Article
Microbiology
Kun Zhang, Yanling Zhang, Maocheng Deng, Pengcheng Wang, Xiu Yue, Pandeng Wang, Wenjun Li
Summary: In this study, the dynamics of microbial and viral communities in an expanded granular sludge bed (EGSB) reactor were investigated. The results showed that COD, VSS/TSS ratio, and temperature were the main factors affecting the microbial community structure. The study also identified key genes involved in nitrogen cycling, with the dissimilatory nitrate reduction to ammonia (DNRA) and denitrification pathways dominating in the anaerobic system. The findings provide insights for the optimization of engineered systems.
FRONTIERS IN MICROBIOLOGY
(2023)
Editorial Material
Microbiology
Hongchen Jiang, Wen-Jun Li, Nils-Kare Birkeland, Dilfuza Egamberdieva
FRONTIERS IN MICROBIOLOGY
(2023)
Article
Pharmacology & Pharmacy
Qian Du, Xin Xi, Jie Dong, Tongyan Zhang, Dongxuan Li, Yuzhu Dong, Wenjun Li, Guili Huang, Jun Zhu, Hailong Ran, Jinghui Gou, Cheng Chen, Zhanfeng Bai, Qinglong Liu, Wei Yao, Lei Zhang, Yutian Bi, Songqing Liu
Summary: This study found that early active pharmacy infectious disease consultation can reduce 30-day all-cause mortality and improve clinical outcomes in multidrug-resistant organism patients.
FRONTIERS IN PHARMACOLOGY
(2023)
Article
Microbiology
Cale O. Seymour, Marike Palmer, Eric D. Becraft, Ramunas Stepanauskas, Ariel D. Friel, Frederik Schulz, Tanja Woyke, Emiley Eloe-Fadrosh, Dengxun Lai, Jian-Yu Jiao, Zheng-Shuang Hua, Lan Liu, Zheng-Han Lian, Wen-Jun Li, Maria Chuvochina, Brianna K. Finley, Benjamin J. Koch, Egbert Schwartz, Paul Dijkstra, Duane P. Moser, Bruce A. Hungate, Brian P. Hedlund
Summary: The candidate bacterial phylum Omnitrophota is poorly studied. By analyzing genomes and data from the Earth Microbiome Project, researchers found that Omnitrophota are ultra-small cells mainly found in water, sediments, and soils. These bacteria have reduced genomes but retain key metabolic pathways and symbiotic gene clusters, indicating a host-associated lifestyle. Additionally, stable-isotope probing identified certain Omnitrophota families as potential obligate bacterial predators. Overall, most Omnitrophota inhabit various ecosystems as predators or parasites.
NATURE MICROBIOLOGY
(2023)
Article
Microbiology
Yang-Zhi Rao, Yu-Xian Li, Ze-Wei Li, Yan-Ni Qu, Yan-Ling Qi, Jian-Yu Jiao, Wen-Sheng Shu, Zheng-Shuang Hua, Wen-Jun Li
Summary: By using genome-resolved metagenomics, researchers discovered 28 Parvarchaeales-associated metagenome-assembled genomes (MAGs) and identified metabolic differences between Jingweiarchaeales and Parvarchaeales, as well as the adaptation of Parvarchaeales to acidic environments. The study also revealed unique genomic features of Jingweiarchaeum and Haiyanarchaeum that may contribute to their adaptation to high-temperature environments. Overall, this research is important for understanding the strategies and processes of how Candidatus Parvarchaeales microbes adapt to extreme environments.
Article
Biotechnology & Applied Microbiology
Lei Wang, Yan Qu, Wenjun Li, Kai Wang, Song Qin
Summary: The study aimed to investigate the repair effect of tilapia collagen on acute wounds and its effect on the expression level of related genes and their metabolic direction in the repair process. The wound healing effect was observed and evaluated using characterization, histology, and immunohistochemistry. Techniques such as RT-PCR, fluorescence tracer, and frozen section were used to observe the effect of fish collagen on gene expression and metabolic direction in wound repair.
FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY
(2023)