Species From Feces: Order-Wide Identification of Chiroptera From Guano and Other Non-Invasive Genetic Samples

Multiple mortality events in bats: a global review

(2016) Thomas J. O'Shea et al.   MAMMAL REVIEW

Environment, host, and fungal traits predict continental-scale white-nose syndrome in bats

(2016) D. T. S. Hayman et al.   Science Advances

Bats as bioindicators of heavy metal pollution: history and prospect

(2015) Jan Zukal et al.   MAMMALIAN BIOLOGY

DNA barcodes for ecology, evolution, and conservation

(2015) W. John Kress et al.   TRENDS IN ECOLOGY & EVOLUTION

A method for PCR-based identification of bat species from fecal samples

(2015) Jennifer M. Korstian et al.   Conservation Genetics Resources

Using DNA barcoding to improve bat carcass identification at wind farms in the United States

(2015) Jennifer M. Korstian et al.   Conservation Genetics Resources

Detection of Low-Level Mixed-Population Drug Resistance in Mycobacterium tuberculosis Using High Fidelity Amplicon Sequencing

(2015) Rebecca E. Colman et al.   PLoS One

Massively parallel multiplex DNA sequencing for specimen identification using an Illumina MiSeq platform

(2015) Shadi Shokralla et al.   Scientific Reports

Short Communication Utility of DNA barcoding for rapid and accurate assessment of bat diversity in Malaysia in the absence of formally described species

(2014) J.-J. Wilson et al.   GENETICS AND MOLECULAR RESEARCH

Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform

(2013) James J. Kozich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Use of RNAlater® as a preservation method for parasitic coprology studies in wild-living chimpanzees

(2013) P. Drakulovski et al.   EXPERIMENTAL PARASITOLOGY

Non-invasive genetics can help find rare species: a case study with Rhinolophus mehelyi and R. euryale (Rhinolophidae: Chiroptera) in Western Europe

(2013) Sébastien J. Puechmaille et al.   MAMMALIA

DNA barcoding of bark and ambrosia beetles reveals excessive NUMTs and consistent east-west divergence across Palearctic forests

(2013) Bjarte H. Jordal et al.   Molecular Ecology Resources

Barcoding in the dark?: A critical view of the sufficiency of zoological DNA barcoding databases and a plea for broader integration of taxonomic knowledge

(2013) Sebastian Kvist   MOLECULAR PHYLOGENETICS AND EVOLUTION

Empirical Assessment of Non-Invasive Population Genetics in Bats: Comparison of DNA Quality from Faecal and Tissue Samples

(2012) Emma S. M. Boston et al.   ACTA CHIROPTEROLOGICA

Genetic Diversity of Northeastern Palaearctic Bats as Revealed by DNA Barcodes

(2012) Sergei V. Kruskop et al.   ACTA CHIROPTEROLOGICA

An update on DNA barcoding: low species coverage and numerous unidentified sequences

(2012) Shiyang Kwong et al.   CLADISTICS

Evaluation of different storage methods to characterize the fecal bacterial communities of captive western lowland gorillas (Gorilla gorilla gorilla)

(2012) Klára Vlčková et al.   JOURNAL OF MICROBIOLOGICAL METHODS

DNA barcoding and genetic diversity of phyllostomid bats from the Yucatan Peninsula with comparisons to Central America

(2012) A. HERNÁNDEZ-DÁVILA et al.   Molecular Ecology Resources

Bats as bioindicators - the need of a standardized method for acoustic bat activity surveys

(2012) Peter Stahlschmidt et al.   Methods in Ecology and Evolution

Accurate, Rapid Taxonomic Classification of Fungal Large-Subunit rRNA Genes

(2011) Kuan-Liang Liu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

PrimerProspector: de novo design and taxonomic analysis of barcoded polymerase chain reaction primers

(2011) William A. Walters et al.   BIOINFORMATICS

Roosts and home ranges of spotted bats (Euderma maculatum) in northern Arizona

(2011) Carol L. Chambers et al.   CANADIAN JOURNAL OF ZOOLOGY

Limited efficiency of universal mini-barcode primers for DNA amplification from desert reptiles, birds and mammals

(2011) I.A. Arif et al.   GENETICS AND MOLECULAR RESEARCH

Guidelines of the American Society of Mammalogists for the use of wild mammals in research

(2011) Robert S. Sikes et al.   JOURNAL OF MAMMALOGY

Using echolocation monitoring to model bat occupancy and inform mitigations at wind energy facilities

(2011) Theodore J. Weller et al.   JOURNAL OF WILDLIFE MANAGEMENT

Five years of FISH-BOL: Brief status report

(2011) Sven Becker et al.   Mitochondrial DNA

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology

Neotropical Bats: Estimating Species Diversity with DNA Barcodes

(2011) Elizabeth L. Clare et al.   PLoS One

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree

(2010) Frederick A Matsen et al.   BMC BIOINFORMATICS

An In silico approach for the evaluation of DNA barcodes

(2010) Gentile Ficetola et al.   BMC GENOMICS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Biopython: freely available Python tools for computational molecular biology and bioinformatics

(2009) P. J. A. Cock et al.   BIOINFORMATICS

The campaign to DNA barcode all fishes, FISH-BOL

(2009) R. D. Ward et al.   JOURNAL OF FISH BIOLOGY

Two-step multiplex polymerase chain reaction improves the speed and accuracy of genotyping using DNA from noninvasive and museum samples

(2009) M. ARANDJELOVIC et al.   Molecular Ecology Resources

Leader of the pack: faecal pellet deposition order impacts PCR amplification in wombats

(2009) F. M. WALKER et al.   Molecular Ecology Resources

Carpe noctem: the importance of bats as bioindicators

(2009) G Jones et al.   Endangered Species Research

A universal DNA mini-barcode for biodiversity analysis

(2008) Isabelle Meusnier et al.   BMC GENOMICS

First application of satellite telemetry to track African straw-coloured fruit bat migration

(2008) H. V. Richter et al.   JOURNAL OF ZOOLOGY

Many species in one: DNA barcoding overestimates the number of species when nuclear mitochondrial pseudogenes are coamplified

(2008) H. Song et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fecal collection, ambient preservation, and DNA extraction for PCR amplification of bacterial and human markers from human feces

(2007) Jordan M. Nechvatal et al.   JOURNAL OF MICROBIOLOGICAL METHODS

DNA BARCODING: CO1 DNA barcoding amphibians: take the chance, meet the challenge

(2007) M. ALEX SMITH et al.   Molecular Ecology Resources

DNA barcoding in surveys of small mammal communities: a field study in Suriname

(2007) ALEX V. BORISENKO et al.   Molecular Ecology Resources