Sensitive Detection and Simultaneous Discrimination of Influenza A and B Viruses in Nasopharyngeal Swabs in a Single Assay Using Next-Generation Sequencing-Based Diagnostics

Widespread detection of highly pathogenic H5 influenza viruses in wild birds from the Pacific Flyway of the United States

(2016) S. N. Bevins et al.   Scientific Reports

Identification and characterization of a highly pathogenic H5N1 avian influenza A virus during an outbreak in vaccinated chickens in Egypt

(2015) O. Amen et al.   VIRUS RESEARCH

A cloud-compatible bioinformatics pipeline for ultrarapid pathogen identification from next-generation sequencing of clinical samples

(2014) S. N. Naccache et al.   GENOME RESEARCH

Universal Influenza B Virus Genomic Amplification Facilitates Sequencing, Diagnostics, and Reverse Genetics

(2014) B. Zhou et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Comparison of Simplexa Flu A/B & RSV PCR with Cytospin-Immunofluorescence and Laboratory-Developed TaqMan PCR in Predominantly Adult Hospitalized Patients

(2014) M. L. Landry et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Pathogenic influenza B virus in the ferret model establishes lower respiratory tract infection

(2014) S. S. H. Huang et al.   JOURNAL OF GENERAL VIROLOGY

Clinical and epidemiological characteristics of a fatal case of avian influenza A H10N8 virus infection: a descriptive study

(2014) HaiYing Chen et al.   LANCET

Sequencing depth and coverage: key considerations in genomic analyses

(2014) David Sims et al.   NATURE REVIEWS GENETICS

Simultaneous and complete genome sequencing of influenza A and B with high coverage by Illumina MiSeq Platform

(2013) Wiriya Rutvisuttinunt et al.   JOURNAL OF VIROLOGICAL METHODS

Genomic signature and protein sequence analysis of a novel influenza A (H7N9) virus that causes an outbreak in humans in China

(2013) Qi Liu et al.   MICROBES AND INFECTION

Human Infection with a Novel Avian-Origin Influenza A (H7N9) Virus

(2013) Rongbao Gao et al.   NEW ENGLAND JOURNAL OF MEDICINE

New World Bats Harbor Diverse Influenza A Viruses

(2013) Suxiang Tong et al.   PLoS Pathogens

A single E105K mutation far from the active site of influenza B virus neuraminidase contributes to reduced susceptibility to multiple neuraminidase-inhibitor drugs

(2012) Seiichiro Fujisaki et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Molecular Characterization of the Predominant Influenza A(H1N1)pdm09 Virus in Mexico, December 2011–February 2012

(2012) Daniela de la Rosa-Zamboni et al.   PLoS One

Ultrasensitive detection of rare mutations using next-generation targeted resequencing

(2011) Patrick Flaherty et al.   NUCLEIC ACIDS RESEARCH

Detection of E119V and E119I Mutations in Influenza A (H3N2) Viruses Isolated from an Immunocompromised Patient: Challenges in Diagnosis of Oseltamivir Resistance

(2010) M. Okomo-Adhiambo et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Genomic events contributing to the high prevalence of amantadine-resistant influenza A/H3N2

(2010) Hassan Zaraket et al.   ANTIVIRAL THERAPY

Comparison of the performance of direct fluorescent antibody staining, a point-of-care rapid antigen test and virus isolation with that of RT-PCR for the detection of novel 2009 influenza A (H1N1) virus in respiratory specimens

(2010) T. Ganzenmueller et al.   JOURNAL OF MEDICAL MICROBIOLOGY

Genomic Signature and Mutation Trend Analysis of Pandemic (H1N1) 2009 Influenza A Virus

(2010) Chungen Pan et al.   PLoS One

Reassortment of Pandemic H1N1/2009 Influenza A Virus in Swine

(2010) D. Vijaykrishna et al.   SCIENCE

Low Sensitivity of Rapid Diagnostic Test for Influenza

(2009) Timothy M. Uyeki et al.   CLINICAL INFECTIOUS DISEASES

Emergence of H274Y oseltamivir-resistant A(H1N1) influenza viruses in Japan during the 2008–2009 season

(2009) Tatiana Baranovich et al.   JOURNAL OF CLINICAL VIROLOGY

Single-Reaction Genomic Amplification Accelerates Sequencing and Vaccine Production for Classical and Swine Origin Human Influenza A Viruses

(2009) B. Zhou et al.   JOURNAL OF VIROLOGY

Rapid-Test Sensitivity for Novel Swine-Origin Influenza A (H1N1) Virus in Humans

(2009) Dennis J. Faix et al.   NEW ENGLAND JOURNAL OF MEDICINE

Host Restriction of Avian Influenza Viruses at the Level of the Ribonucleoproteins

(2008) Nadia Naffakh et al.   Annual Review of Microbiology