Bacterial and Archaeal Diversity in the Gastrointestinal Tract of the North American Beaver (Castor canadensis)

Ruminococcal cellulosome systems from rumen to human

(2015) Yonit Ben David et al.   ENVIRONMENTAL MICROBIOLOGY

Kinship, inbreeding and fine-scale spatial structure influence gut microbiota in a hindgut-fermenting tortoise

(2015) Michael L. Yuan et al.   MOLECULAR ECOLOGY

Rumen microbial community composition varies with diet and host, but a core microbiome is found across a wide geographical range

(2015) Gemma Henderson et al.   Scientific Reports

Enzymatic Degradation of (Ligno)cellulose

(2014) Uwe Bornscheuer et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

A Polysaccharide Utilization Locus from an Uncultured Bacteroidetes Phylotype Suggests Ecological Adaptation and Substrate Versatility

(2014) A. K. Mackenzie et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The giraffe (Giraffa camelopardalis) rumen microbiome

(2014) Michael Roggenbuck et al.   FEMS MICROBIOLOGY ECOLOGY

Investigation of the microbial metabolism of carbon dioxide and hydrogen in the kangaroo foregut by stable isotope probing

(2014) Scott Godwin et al.   ISME Journal

High-Throughput DNA Sequencing of the Ruminal Bacteria from Moose (Alces alces) in Vermont, Alaska, and Norway

(2014) Suzanne L. Ishaq et al.   MICROBIAL ECOLOGY

Shedding Light on the Microbial Community of the Macropod Foregut Using 454-Amplicon Pyrosequencing

(2014) Lisa-Maree Gulino et al.   PLoS One

Diversity of Rumen Bacteria in Canadian Cervids

(2014) Robert J. Gruninger et al.   PLoS One

Herbivorous rodents (Neotoma spp.) harbour abundant and active foregut microbiota

(2013) Kevin D. Kohl et al.   ENVIRONMENTAL MICROBIOLOGY

Revealing Nature's Cellulase Diversity: The Digestion Mechanism of Caldicellulosiruptor bescii CelA

(2013) R. Brunecky et al.   SCIENCE

Investigation of the koala (Phascolarctos cinereus) hindgut microbiome via 16S pyrosequencing

(2013) Christopher J. Barker et al.   VETERINARY MICROBIOLOGY

Molecular Diversity of Methanogens in Fecal Samples From Captive Sumatran Orangutans (Pongo abelii)

(2012) HANNAH V. FACEY et al.   AMERICAN JOURNAL OF PRIMATOLOGY

Insight into the bacterial gut microbiome of the North American moose (Alces alces)

(2012) Suzanne L Ishaq et al.   BMC MICROBIOLOGY

Archaea in the foregut of macropod marsupials: PCR and amplicon sequence-based observations

(2012) A.V. Klieve et al.   JOURNAL OF APPLIED MICROBIOLOGY

The Fibrobacteres: an Important Phylum of Cellulose-Degrading Bacteria

(2012) Emma Ransom-Jones et al.   MICROBIAL ECOLOGY

Analysis of the hydrogenotrophic microbiota of wild and captive black howler monkeys (Alouatta pigra) in palenque national park, Mexico

(2011) Noriko Nakamura et al.   AMERICAN JOURNAL OF PRIMATOLOGY

Comparative analyses of foregut and hindgut bacterial communities in hoatzins and cows

(2011) Filipa Godoy-Vitorino et al.   ISME Journal

Phylogenetic analysis of the fecal microbial community in herbivorous land and marine iguanas of the Galápagos Islands using 16S rRNA-based pyrosequencing

(2011) Pei-Ying Hong et al.   ISME Journal

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

Bacterial Diversity in the Cecum of the World’s Largest Living Rodent (Hydrochoerus hydrochaeris)

(2011) M. Alexandra García-Amado et al.   MICROBIAL ECOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

The cellulose-degrading microbial community of the human gut varies according to the presence or absence of methanogens

(2010) Christophe Chassard et al.   FEMS MICROBIOLOGY ECOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

Interactions between gut microbiota, host genetics and diet relevant to development of metabolic syndromes in mice

(2009) Chenhong Zhang et al.   ISME Journal

Bacterial Community in the Crop of the Hoatzin, a Neotropical Folivorous Flying Bird

(2008) F. Godoy-Vitorino et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genomics of cellulosic biofuels

(2008) Edward M. Rubin   NATURE

Worlds within worlds: evolution of the vertebrate gut microbiota

(2008) Ruth E. Ley et al.   NATURE REVIEWS MICROBIOLOGY

Evolution of Mammals and Their Gut Microbes

(2008) R. E. Ley et al.   SCIENCE