Dissipative Particle Dynamics Simulations for Phospholipid Membranes Based on a Four-To-One Coarse-Grained Mapping Scheme

Mechanism of Inhibition of Human Islet Amyloid Polypeptide-Induced Membrane Damage by a Small Organic Fluorogen

(2016) Xiaoxu Li et al.   Scientific Reports

Modeling Aggregation of Ionic Surfactants Using a Smeared Charge Approximation in Dissipative Particle Dynamics Simulations

(2015) Runfang Mao et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Nanodomain Formation of Ganglioside GM1 in Lipid Membrane: Effects of Cholera Toxin-Mediated Cross-Linking

(2015) Huijiao Sun et al.   LANGMUIR

Energy-conserving dissipative particle dynamics with temperature-dependent properties

(2014) Zhen Li et al.   JOURNAL OF COMPUTATIONAL PHYSICS

Theoretical Insight into the Relationship between the Structures of Antimicrobial Peptides and Their Actions on Bacterial Membranes

(2014) Licui Chen et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Morphological Transformations in Polymer Brushes in Binary Mixtures: DPD Study

(2014) Jianli Cheng et al.   LANGMUIR

Martini Force Field Parameters for Glycolipids

(2013) César A. López et al.   Journal of Chemical Theory and Computation

Calculations of Critical Micelle Concentration by Dissipative Particle Dynamics Simulations: The Role of Chain Rigidity

(2013) Ming-Tsung Lee et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Prediction of the Critical Micelle Concentration of Nonionic Surfactants by Dissipative Particle Dynamics Simulations

(2013) Aleksey Vishnyakov et al.   Journal of Physical Chemistry Letters

Lipid mediated packing of transmembrane helices – a dissipative particle dynamics study

(2013) Ayelet Benjamini et al.   Soft Matter

Molecular view on protein sorting into liquid-ordered membrane domains mediated by gangliosides and lipid anchors

(2012) Djurre H. de Jong et al.   FARADAY DISCUSSIONS

DPD Simulation of Protein Conformations: From α-Helices to β-Structures

(2012) Aleksey Vishnyakov et al.   Journal of Physical Chemistry Letters

Semi-bottom-up coarse graining of water based on microscopic simulations

(2011) Lianghui Gao et al.   JOURNAL OF CHEMICAL PHYSICS

Gay-Berne and electrostatic multipole based coarse-grain potential in implicit solvent

(2011) Johnny Wu et al.   JOURNAL OF CHEMICAL PHYSICS

Water Defect and Pore Formation in Atomistic and Coarse-Grained Lipid Membranes: Pushing the Limits of Coarse Graining

(2011) W.F. Drew Bennett et al.   Journal of Chemical Theory and Computation

Communications: Self-energy and corresponding virial contribution of electrostatic interactions in dissipative particle dynamics: Simulations of cationic lipid bilayers

(2010) Lianghui Gao et al.   JOURNAL OF CHEMICAL PHYSICS

Self-Assembly of Lamellar Lipid−DNA Complexes Simulated by Explicit Solvent Counterion Model

(2010) Lianghui Gao et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Versatile Object-Oriented Toolkit for Coarse-Graining Applications

(2009) Victor Rühle et al.   Journal of Chemical Theory and Computation

Effects of induced tension and electrostatic interactions on the mechanisms of antimicrobial peptide translocation across lipid bilayer

(2009) Lianghui Gao et al.   Soft Matter

Concurrent triple-scale simulation of molecular liquids

(2008) Rafael Delgado-Buscalioni et al.   JOURNAL OF CHEMICAL PHYSICS

The MARTINI Coarse-Grained Force Field: Extension to Proteins

(2008) Luca Monticelli et al.   Journal of Chemical Theory and Computation

Chemistry: Power play

(2008) Brendan Borrell   NATURE

Large-Scale Molecular Dynamics Simulations of Self-Assembling Systems

(2008) M. L. Klein et al.   SCIENCE

Tension-induced vesicle fusion: pathways and pore dynamics

(2008) Lianghui Gao et al.   Soft Matter