Involvement of Alternative Splicing in Barley Seed Germination

Changes in cell wall polysaccharide composition, gene transcription and alternative splicing in germinating barley embryos

(2016) Qisen Zhang et al.   JOURNAL OF PLANT PHYSIOLOGY

Genome-wide cataloging and analysis of alternatively spliced genes in cereal crops

(2015) Xiang Jia Min et al.   BMC GENOMICS

Genome-Wide Analysis of Alternative Splicing during Development and Drought Stress in Maize

(2015) Shawn R. Thatcher et al.   PLANT PHYSIOLOGY

Genome-Wide Analysis of Alternative Splicing in Zea mays: Landscape and Genetic Regulation

(2014) S. R. Thatcher et al.   PLANT CELL

Global Dissection of Alternative Splicing in Paleopolyploid Soybean

(2014) Yanting Shen et al.   PLANT CELL

Genome-Wide Analysis of Heat-Sensitive Alternative Splicing in Physcomitrella patens

(2014) C.-Y. Chang et al.   PLANT PHYSIOLOGY

Data, information, knowledge and principle: back to metabolism in KEGG

(2013) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

The Plant Cell Reviews Alternative Splicing

(2013) N. A. Eckardt   PLANT CELL

Alternative Splicing at the Intersection of Biological Timing, Development, and Stress Responses

(2013) D. Staiger et al.   PLANT CELL

Complexity of the Alternative Splicing Landscape in Plants

(2013) A. S. N. Reddy et al.   PLANT CELL

Genome-Wide Detection of Condition-Sensitive Alternative Splicing in Arabidopsis Roots

(2013) W. Li et al.   PLANT PHYSIOLOGY

An Autoregulatory Loop Controlling Arabidopsis HsfA2 Expression: Role of Heat Shock-Induced Alternative Splicing

(2013) J. Liu et al.   PLANT PHYSIOLOGY

Auxin controls seed dormancy through stimulation of abscisic acid signaling by inducing ARF-mediated ABI3 activation in Arabidopsis

(2013) X. Liu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Hormonal Interactions in the Regulation of Plant Development

(2012) Marleen Vanstraelen et al.   Annual Review of Cell and Developmental Biology

Transcriptome survey reveals increased complexity of the alternative splicing landscape inArabidopsis

(2012) Yamile Marquez et al.   GENOME RESEARCH

Alternative splicing in plants – coming of age

(2012) Naeem H. Syed et al.   TRENDS IN PLANT SCIENCE

Induction of vacuolar invertase inhibitor mRNA in potato tubers contributes to cold-induced sweetening resistance and includes spliced hybrid mRNA variants

(2011) David A. Brummell et al.   JOURNAL OF EXPERIMENTAL BOTANY

Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis

(2011) Maria Kalyna et al.   NUCLEIC ACIDS RESEARCH

Two splice variants of the IDD14 transcription factor competitively form nonfunctional heterodimers which may regulate starch metabolism

(2011) Pil Joon Seo et al.   Nature Communications

SOAPsplice: Genome-Wide ab initio Detection of Splice Junctions from RNA-Seq Data

(2011) Songbo Huang et al.   Frontiers in Genetics

Comprehensive analysis of rice DREB2-type genes that encode transcription factors involved in the expression of abiotic stress-responsive genes

(2010) Satoko Matsukura et al.   MOLECULAR GENETICS AND GENOMICS

The Conserved Splicing Factor SUA Controls Alternative Splicing of the Developmental RegulatorABI3inArabidopsis

(2010) Matteo Sugliani et al.   PLANT CELL

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

SOAP2: an improved ultrafast tool for short read alignment

(2009) R. Li et al.   BIOINFORMATICS