Development of Genomic Microsatellite Markers in Carthamus tinctorius L. (Safflower) Using Next Generation Sequencing and Assessment of Their Cross-Species Transferability and Utility for Diversity Analysis

Genetic analysis of safflower domestication

(2014) Stephanie A Pearl et al.   BMC PLANT BIOLOGY

Large-scale microsatellite development in grasspea (Lathyrus sativus L.), an orphan legume of the arid areas

(2014) Tao Yang et al.   BMC PLANT BIOLOGY

Development of a set of genomic microsatellite markers in tea (Camellia L.) (Camelliaceae)

(2013) Sapinder Bali et al.   MOLECULAR BREEDING

Genetic assessment of safflower (Carthamus tinctoriusL.) collection with microsatellite markers acquired via pyrosequencing method

(2013) Gi-An Lee et al.   Molecular Ecology Resources

Characterization and high cross-species transferability of microsatellite markers from the floral transcriptome ofAspidistra saxicola(Asparagaceae)

(2013) Danni Huang et al.   Molecular Ecology Resources

Next-Generation Sequencing of the Chrysanthemum nankingense (Asteraceae) Transcriptome Permits Large-Scale Unigene Assembly and SSR Marker Discovery

(2013) Haibin Wang et al.   PLoS One

Characterizing and measuring bias in sequence data

(2013) Michael G Ross et al.   GENOME BIOLOGY

Development of genomic-derived simple sequence repeat markers in Hevea brasiliensis from 454 genome shotgun sequences

(2012) Wirulda Pootakham et al.   PLANT BREEDING

Development and cross-species/genera transferability of microsatellite markers discovered using 454 genome sequencing in chokecherry (Prunus virginiana L.)

(2012) Hongxia Wang et al.   PLANT CELL REPORTS

NGS QC Toolkit: A Toolkit for Quality Control of Next Generation Sequencing Data

(2012) Ravi K. Patel et al.   PLoS One

The First Illumina-Based De Novo Transcriptome Sequencing and Analysis of Safflower Flowers

(2012) Huang Lulin et al.   PLoS One

SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler

(2012) Ruibang Luo et al.   GigaScience

Using next-generation sequencing approaches to isolate simple sequence repeat (SSR) loci in the plant sciences

(2011) Juan E. Zalapa et al.   AMERICAN JOURNAL OF BOTANY

De novo assembly and characterization of root transcriptome using Illumina paired-end sequencing and development of cSSR markers in sweetpotato (Ipomoea batatas)

(2011) Zhangying Wang et al.   BMC GENOMICS

Characterization of the sesame (Sesamum indicum L.) global transcriptome using Illumina paired-end sequencing and development of EST-SSR markers

(2011) Wenliang Wei et al.   BMC GENOMICS

Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh]

(2011) Sutapa Dutta et al.   BMC PLANT BIOLOGY

Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries

(2011) Daniel Aird et al.   GENOME BIOLOGY

Wild safflower species (Carthamus oxyacanthus): A possible source of resistance to the safflower fly (Acanthiophilus helianthi)

(2010) Mohammad Reza Sabzalian et al.   CROP PROTECTION

Transferability of non-genic microsatellite and gene-based sunflower markers to safflower

(2010) M. J. García-Moreno et al.   EUPHYTICA

Microsatellite markers: an overview of the recent progress in plants

(2010) Rajwant K. Kalia et al.   EUPHYTICA

Biodiesel from safflower oil and its application in a diesel engine

(2010) Cumali Ilkılıç et al.   FUEL PROCESSING TECHNOLOGY

Development and characterization of genomic microsatellite markers in safflower (Carthamus tinctorius L.)

(2010) Y. A. S. Hamdan et al.   PLANT BREEDING

Characterization of microsatellites and gene contents from genome shotgun sequences of mungbean (Vigna radiata (L.) Wilczek)

(2009) Sithichoke Tangphatsornruang et al.   BMC PLANT BIOLOGY

EST-SSR marker-based assay for the genetic purity assessment of safflower hybrids

(2009) V. Naresh et al.   EUPHYTICA

Genetic variation of Carthamus tinctorius L. and related species revealed by SRAP analysis

(2008) Sa Peng et al.   BIOCHEMICAL SYSTEMATICS AND ECOLOGY

BatchPrimer3: A high throughput web application for PCR and sequencing primer design

(2008) Frank M You et al.   BMC BIOINFORMATICS

Analysis of 90 Mb of the potato genome reveals conservation of gene structures and order with tomato but divergence in repetitive sequence composition

(2008) Wei Zhu et al.   BMC GENOMICS

Assaying polymorphism at DNA level for genetic diversity diagnostics of the safflower (Carthamus tinctorius L.) world germplasm resources

(2008) Deepmala Sehgal et al.   GENETICA

Chloroplast DNA diversity reveals the contribution of two wild species to the origin and evolution of diploid safflower (Carthamus tinctorius L.)

(2008) Deepmala Sehgal et al.   GENOME

SSRs and INDELs mined from the sunflower EST database: abundance, polymorphisms, and cross-taxa utility

(2008) Adam Heesacker et al.   THEORETICAL AND APPLIED GENETICS

Potential for seed-mediated gene flow in agroecosystems from transgenic safflower (Carthamus tinctorius L.) intended for plant molecular farming

(2008) Marc A. McPherson et al.   TRANSGENIC RESEARCH