Against All Odds: Trehalose-6-Phosphate Synthase and Trehalase Genes in the Bdelloid Rotifer Adineta vaga Were Acquired by Horizontal Gene Transfer and Are Upregulated during Desiccation

Gateway to genetic exchange? DNA double-strand breaks in the bdelloid rotiferAdineta vagasubmitted to desiccation

(2014) B. Hespeels et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

The sucrose–trehalose 6-phosphate (Tre6P) nexus: specificity and mechanisms of sucrose signalling by Tre6P

(2014) Umesh Prasad Yadav et al.   JOURNAL OF EXPERIMENTAL BOTANY

Functional screening of a cDNA library from the desiccation-tolerant plant Selaginella lepidophylla in yeast mutants identifies trehalose biosynthesis genes of plant and microbial origin

(2014) Suzana Pampurova et al.   JOURNAL OF PLANT RESEARCH

SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information

(2014) Marco Biasini et al.   NUCLEIC ACIDS RESEARCH

Trehalose metabolism in plants

(2014) John Edward Lunn et al.   PLANT JOURNAL

The First Prokaryotic Trehalose Synthase Complex Identified in the Hyperthermophilic Crenarchaeon Thermoproteus tenax

(2014) Melanie Zaparty et al.   PLoS One

Fine tuning of trehalose biosynthesis and hydrolysis as novel tools for the generation of abiotic stress tolerant plants

(2014) Ines Delorge et al.   Frontiers in Plant Science

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genomic evidence for ameiotic evolution in the bdelloid rotifer Adineta vaga

(2013) Jean-François Flot et al.   NATURE

Overexpression of the Trehalase Gene AtTRE1 Leads to Increased Drought Stress Tolerance in Arabidopsis and Is Involved in Abscisic Acid-Induced Stomatal Closure

(2013) H. Van Houtte et al.   PLANT PHYSIOLOGY

MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity

(2012) Y. Wang et al.   NUCLEIC ACIDS RESEARCH

Expansive Evolution of the TREHALOSE-6-PHOSPHATE PHOSPHATASE Gene Family in Arabidopsis

(2012) L. Vandesteene et al.   PLANT PHYSIOLOGY

Biochemical Diversification through Foreign Gene Expression in Bdelloid Rotifers

(2012) Chiara Boschetti et al.   PLoS Genetics

ProtTest 3: fast selection of best-fit models of protein evolution

(2011) Diego Darriba et al.   BIOINFORMATICS

Trehalose: Current Use and Future Applications

(2011) Satoshi Ohtake et al.   JOURNAL OF PHARMACEUTICAL SCIENCES

raxmlGUI: a graphical front-end for RAxML

(2011) Daniele Silvestro et al.   ORGANISMS DIVERSITY & EVOLUTION

Mechanisms Associated with Cellular Desiccation Tolerance in the Animal Extremophile Artemia

(2011) Steffen Hengherr et al.   PHYSIOLOGICAL AND BIOCHEMICAL ZOOLOGY

Trehalose and Vitreous States: Desiccation Tolerance of Dormant Stages of the Crustaceans Triops and Daphnia

(2011) S. Hengherr et al.   PHYSIOLOGICAL AND BIOCHEMICAL ZOOLOGY

Overexpression of the trehalose-6-phosphate synthase gene OsTPS1 enhances abiotic stress tolerance in rice

(2011) Hao-Wen Li et al.   PLANTA

Trehalose-6-Phosphate: Connecting Plant Metabolism and Development

(2011) Jathish Ponnu et al.   Frontiers in Plant Science

MetaPIGA v2.0: maximum likelihood large phylogeny estimation using the metapopulation genetic algorithm and other stochastic heuristics

(2010) Raphaël Helaers et al.   BMC BIOINFORMATICS

Foreign genes and novel hydrophilic protein genes participate in the desiccation response of the bdelloid rotifer Adineta ricciae

(2010) C. Boschetti et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Genome Structure of Bdelloid Rotifers: Shaped by Asexuality or Desiccation?

(2010) E. A. Gladyshev et al.   JOURNAL OF HEREDITY

A Single Active Trehalose-6-P Synthase (TPS) and a Family of Putative Regulatory TPS-Like Proteins in Arabidopsis

(2010) Lies Vandesteene et al.   Molecular Plant

Anhydrobiosis-Associated Nuclear DNA Damage and Repair in the Sleeping Chironomid: Linkage with Radioresistance

(2010) Oleg Gusev et al.   PLoS One

Trehalose and plant stress responses: friend or foe?

(2010) Olivier Fernandez et al.   TRENDS IN PLANT SCIENCE

Desiccation survival in an Antarctic nematode: molecular analysis using expressed sequenced tags

(2009) Bishwo N Adhikari et al.   BMC GENOMICS

Discovering genes associated with dormancy in the monogonont rotifer Brachionus plicatilis

(2009) Nadav Y Denekamp et al.   BMC GENOMICS

The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments

(2009) S. A. Bustin et al.   CLINICAL CHEMISTRY

The Cytophaga hutchinsonii ChTPSP: First Characterized Bifunctional TPS–TPP Protein as Putative Ancestor of All Eukaryotic Trehalose Biosynthesis Proteins

(2009) Nelson Avonce et al.   MOLECULAR BIOLOGY AND EVOLUTION

Protein structure prediction on the Web: a case study using the Phyre server

(2009) Lawrence A Kelley et al.   Nature Protocols

Phylogenomics of Unusual Histone H2A Variants in Bdelloid Rotifers

(2009) Karine Van Doninck et al.   PLoS Genetics

TOPALi v2: a rich graphical interface for evolutionary analyses of multiple alignments on HPC clusters and multi-core desktops

(2008) I. Milne et al.   BIOINFORMATICS

Degenerate Tetraploidy Was Established Before Bdelloid Rotifer Families Diverged

(2008) J. H. Hur et al.   MOLECULAR BIOLOGY AND EVOLUTION

Vitrification is essential for anhydrobiosis in an African chironomid,Polypedilum vanderplanki

(2008) Minoru Sakurai et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Extreme resistance of bdelloid rotifers to ionizing radiation

(2008) Eugene Gladyshev et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Massive Horizontal Gene Transfer in Bdelloid Rotifers

(2008) E. A. Gladyshev et al.   SCIENCE