Microevolution of Virulence-Related Genes in Helicobacter pylori Familial Infection

Progressive genomic convergence of twoHelicobacter pyloristrains during mixed infection of a patient with chronic gastritis

(2014) Qizhi Cao et al.   GUT

Bidirectional genomic exchange between Helicobacter pylori strains from a family in Coventry, United Kingdom

(2014) Juliane Krebes et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

Analysis of intra-familial transmission of Helicobacter pylori in Japanese families

(2014) T. Osaki et al.   JOURNAL OF MEDICAL MICROBIOLOGY

Proteomic Characterization of Helicobacter pylori CagA Antigen Recognized by Child Serum Antibodies and Its Epitope Mapping by Peptide Array

(2014) Junko Akada et al.   PLoS One

A mutation burst during the acute phase of Helicobacter pylori infection in humans and rhesus macaques

(2014) Bodo Linz et al.   Nature Communications

A random six-phase switch regulates pneumococcal virulence via global epigenetic changes

(2014) Ana Sousa Manso et al.   Nature Communications

Methylome Diversification through Changes in DNA Methyltransferase Sequence Specificity

(2014) Yoshikazu Furuta et al.   PLoS Genetics

Proteome variability amongHelicobacter pyloriisolates clustered according to genomic methylation

(2013) I. Vitoriano et al.   JOURNAL OF APPLIED MICROBIOLOGY

Role of γ-glutamyltranspeptidase in the pathogenesis ofHelicobacter pyloriinfection

(2013) Emiko Rimbara et al.   MICROBIOLOGY AND IMMUNOLOGY

The complex methylome of the human gastric pathogen Helicobacter pylori

(2013) Juliane Krebes et al.   NUCLEIC ACIDS RESEARCH

Helicobacter pylori Genomic Microevolution during Naturally Occurring Transmission between Adults

(2013) Bodo Linz et al.   PLoS One

Helicobacter pylori  -glutamyl transpeptidase and vacuolating cytotoxin promote gastric persistence and immune tolerance

(2013) M. Oertli et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomic evolution and transmission ofHelicobacter pyloriin two South African families

(2013) Xavier Didelot et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Human gastric cancer development with TNF-α-inducing protein secreted from Helicobacter pylori

(2012) Masami Suganuma et al.   CANCER LETTERS

Genome-Wide Survey of Mutual Homologous Recombination in a Highly Sexual Bacterial Species

(2012) Koji Yahara et al.   Genome Biology and Evolution

Non-invasive Genotyping of Helicobacter pylori cagA, vacA, and hopQ from Asymptomatic Children

(2012) Liviu A. Sicinschi et al.   HELICOBACTER

Genome-wide mapping of methylated adenine residues in pathogenic Escherichia coli using single-molecule real-time sequencing

(2012) Gang Fang et al.   NATURE BIOTECHNOLOGY

Movement of DNA sequence recognition domains between non-orthologous proteins

(2012) Yoshikazu Furuta et al.   NUCLEIC ACIDS RESEARCH

Comparative Transcriptomics of H. pylori Strains AM5, SS1 and Their hpyAVIBM Deletion Mutants: Possible Roles of Cytosine Methylation

(2012) Ritesh Kumar et al.   PLoS One

Evolution in an oncogenic bacterial species with extreme genome plasticity: Helicobacter pylori East Asian genomes

(2011) Mikihiko Kawai et al.   BMC MICROBIOLOGY

Recognition of Host Proteins by Helicobacter Cysteine-Rich Protein C

(2011) Bernd Roschitzki et al.   CURRENT MICROBIOLOGY

Review Application of RNA-seq to reveal the transcript profile in bacteria

(2011) A.C. Pinto et al.   GENETICS AND MOLECULAR RESEARCH

Helicobacter pylori AlpA and AlpB Bind Host Laminin and Influence Gastric Inflammation in Gerbils

(2011) Olga A. Senkovich et al.   INFECTION AND IMMUNITY

Effects of Blood Group Antigen–Binding Adhesin Expression during Helicobacter pylori Infection of Mongolian Gerbils

(2011) Tomoyuki Ohno et al.   JOURNAL OF INFECTIOUS DISEASES

Characterization of DNA methyltransferase specificities using single-molecule, real-time DNA sequencing

(2011) Tyson A. Clark et al.   NUCLEIC ACIDS RESEARCH

Domain Movement within a Gene: A Novel Evolutionary Mechanism for Protein Diversification

(2011) Yoshikazu Furuta et al.   PLoS One

Phasevarion Mediated Epigenetic Gene Regulation in Helicobacter pylori

(2011) Yogitha N. Srikhanta et al.   PLoS One

Helicobacter pylori genome evolution during human infection

(2011) L. Kennemann et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacterial epidemiology and biology - lessons from genome sequencing

(2011) Julian Parkhill et al.   GENOME BIOLOGY

Helicobacter pylori HtrA is a new secreted virulence factor that cleaves E-cadherin to disrupt intercellular adhesion

(2010) Benjamin Hoy et al.   EMBO REPORTS

Helicobacter pylori γ-Glutamyl Transpeptidase Is a Pathogenic Factor in the Development of Peptic Ulcer Disease

(2010) Min Gong et al.   GASTROENTEROLOGY

Direct detection of DNA methylation during single-molecule, real-time sequencing

(2010) Benjamin A Flusberg et al.   NATURE METHODS

Microevolution of Helicobacter pylori during Prolonged Infection of Single Hosts and within Families

(2010) Giovanna Morelli et al.   PLoS Genetics

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Geographic distribution of methyltransferases of Helicobacter pylori: evidence of human host population isolation and migration

(2009) Filipa F Vale et al.   BMC MICROBIOLOGY

Phasevarions Mediate Random Switching of Gene Expression in Pathogenic Neisseria

(2009) Yogitha N. Srikhanta et al.   PLoS Pathogens

Helicobacter pyloriHopQ outer membrane protein attenuates bacterial adherence to gastric epithelial cells

(2008) John T. Loh et al.   FEMS MICROBIOLOGY LETTERS

CDD: specific functional annotation with the Conserved Domain Database

(2008) A. Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH