Transcriptome Sequencing Reveals the Virulence and Environmental Genetic Programs of Vibrio vulnificus Exposed to Host and Estuarine Conditions

Genotypic Diversity and Virulence Characteristics of Clinical and Environmental Vibrio vulnificus Isolates from the Baltic Sea Region

(2013) Nadja Bier et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Implications of Chitin Attachment for the Environmental Persistence and Clinical Nature of the Human Pathogen Vibrio vulnificus

(2013) Tiffany C. Williams et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

(2013) Y. Liao et al.   BIOINFORMATICS

Survival of Vibrio vulnificus Genotypes in Male and Female Serum, and Production of Siderophores in Human Serum and Seawater

(2013) Hye-young Kim et al.   Foodborne Pathogens and Disease

Loss of Sigma Factor RpoN Increases Intestinal Colonization of Vibrio parahaemolyticus in an Adult Mouse Model

(2013) W. Brian Whitaker et al.   INFECTION AND IMMUNITY

IscR Is a Global Regulator Essential for Pathogenesis of Vibrio vulnificus and Induced by Host Cells

(2013) Jong Gyu Lim et al.   INFECTION AND IMMUNITY

The syp Enhancer Sequence Plays a Key Role in Transcriptional Activation by the  54-Dependent Response Regulator SypG and in Biofilm Formation and Host Colonization by Vibrio fischeri

(2013) V. A. Ray et al.   JOURNAL OF BACTERIOLOGY

Bacterial Quorum Sensing: Its Role in Virulence and Possibilities for Its Control

(2013) S. T. Rutherford et al.   Cold Spring Harbor Perspectives in Medicine

Insight into the evolution of Vibrio vulnificus biotype 3's genome

(2013) Vera Efimov et al.   Frontiers in Microbiology

The ttpC Gene Is Contained in Two of Three TonB Systems in the Human Pathogen Vibrio vulnificus, but Only One Is Active in Iron Transport and Virulence

(2012) R. J. Kustusch et al.   JOURNAL OF BACTERIOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Gene Ontology Annotations and Resources

(2012)   NUCLEIC ACIDS RESEARCH

Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation

(2012) Davis J. McCarthy et al.   NUCLEIC ACIDS RESEARCH

Pyrosequencing-Based Comparative Genome Analysis of Vibrio vulnificus Environmental Isolates

(2012) Shatavia S. Morrison et al.   PLoS One

pilF polymorphism-based real-time PCR to distinguish Vibrio vulnificus strains of human health relevance

(2011) Craig Baker-Austin et al.   FOOD MICROBIOLOGY

Enterohemorrhagic Escherichia coli Virulence Regulation by Two Bacterial Adrenergic Kinases, QseC and QseE

(2011) Jacqueline Njoroge et al.   INFECTION AND IMMUNITY

Genotype Is Correlated with but Does Not Predict Virulence ofVibriovulnificusBiotype 1 in Subcutaneously Inoculated, Iron Dextran-Treated Mice

(2011) Patrick C. Thiaville et al.   INFECTION AND IMMUNITY

The UniProt-GO Annotation database in 2011

(2011) E. C. Dimmer et al.   NUCLEIC ACIDS RESEARCH

Vibrio vulnificus genome suggests two distinct ecotypes

(2010) Thomas M. Rosche et al.   Environmental Microbiology Reports

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Vibrio vulnificus produces quorum sensing signals of the AHL-class

(2009) Esmeralda Valiente et al.   FEMS MICROBIOLOGY ECOLOGY

Vibrio vulnificus: Disease and Pathogenesis

(2009) M. K. Jones et al.   INFECTION AND IMMUNITY

The Vibrio cholerae Flagellar Regulatory Hierarchy Controls Expression of Virulence Factors

(2009) K. A. Syed et al.   JOURNAL OF BACTERIOLOGY

Role of NtrC-regulated exopolysaccharides in the biofilm formation and pathogenic interaction ofVibrio vulnificus

(2009) Han-Suk Kim et al.   MOLECULAR MICROBIOLOGY

Cyclic-di-GMP Regulates Extracellular Polysaccharide Production, Biofilm Formation, and Rugose Colony Development by Vibrio vulnificus

(2008) A. Nakhamchik et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Ontologizer 2.0--a multifunctional tool for GO term enrichment analysis and data exploration

(2008) S. Bauer et al.   BIOINFORMATICS

Multiplex PCR Assay for Detection and Simultaneous Differentiation of Genotypes of Vibrio vulnificus Biotype 1

(2008) Elizabeth B. Warner et al.   Foodborne Pathogens and Disease

Role of Cyclic Di-GMP during El Tor Biotype Vibrio cholerae Infection: Characterization of the In Vivo-Induced Cyclic Di-GMP Phosphodiesterase CdpA

(2008) R. Tamayo et al.   INFECTION AND IMMUNITY

Global Gene Expression as a Function of the Iron Status of the Bacterial Cell: Influence of Differentially Expressed Genes in the Virulence of the Human Pathogen Vibrio vulnificus

(2008) A. F. Alice et al.   INFECTION AND IMMUNITY

A multifaceted role for polyamines in bacterial pathogens

(2008) Pratik Shah et al.   MOLECULAR MICROBIOLOGY

Molecular Architecture of the "Stressosome," a Signal Integration and Transduction Hub

(2008) J. Marles-Wright et al.   SCIENCE