Whole Transcriptome Profiling of Maize during Early Somatic Embryogenesis Reveals Altered Expression of Stress Factors and Embryogenesis-Related Genes

Insights into the Maize Pan-Genome and Pan-Transcriptome

(2014) C. N. Hirsch et al.   PLANT CELL

Maize Gene Atlas Developed by RNA Sequencing and Comparative Evaluation of Transcriptomes Based on RNA Sequencing and Microarrays

(2014) Rajandeep S. Sekhon et al.   PLoS One

A proposal to use gamete cycling in vitro to improve crops and livestock

(2013) Seth C Murray et al.   NATURE BIOTECHNOLOGY

PlantGSEA: a gene set enrichment analysis toolkit for plant community

(2013) Xin Yi et al.   NUCLEIC ACIDS RESEARCH

Regulation of the seed to seedling developmental phase transition by the LAFL and VAL transcription factor networks

(2013) Haiyan Jia et al.   Wiley Interdisciplinary Reviews-Developmental Biology

The specificity and genetic background of the rye (Secale cereale L.) tissue culture response

(2012) Małgorzata Targońska et al.   PLANT CELL REPORTS

Genome Expression Profile Analysis of the Immature Maize Embryo during Dedifferentiation

(2012) Yaou Shen et al.   PLoS One

The Role of PIN Auxin Efflux Carriers in Polar Auxin Transport and Accumulation and Their Effect on Shaping Maize Development

(2011) Cristian Forestan et al.   Molecular Plant

AGAMOUS Terminates Floral Stem Cell Maintenance in Arabidopsis by Directly Repressing WUSCHEL through Recruitment of Polycomb Group Proteins

(2011) X. Liu et al.   PLANT CELL

Efficient sweet pepper transformation mediated by the BABY BOOM transcription factor

(2011) Iris Heidmann et al.   PLANT CELL REPORTS

LEAFY COTYLEDON1, FUSCA3 expression and auxin treatment in relation to somatic embryogenesis induction in Arabidopsis

(2011) Agnieszka Ledwoń et al.   PLANT GROWTH REGULATION

Genome-wide atlas of transcription during maize development

(2011) Rajandeep S. Sekhon et al.   PLANT JOURNAL

Regulation of Somatic Embryogenesis in Higher Plants

(2010) Xiyan Yang et al.   CRITICAL REVIEWS IN PLANT SCIENCES

Induction of somatic embryogenesis as an example of stress-related plant reactions

(2010) Maria Amely Zavattieri et al.   ELECTRONIC JOURNAL OF BIOTECHNOLOGY

Germin-like proteins (GLPs) in cereal genomes: gene clustering and dynamic roles in plant defence

(2010) James Breen et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Identification of a Maize Locus That Modulates the Hypersensitive Defense Response, Using Mutant-Assisted Gene Identification and Characterization

(2010) S. Chintamanani et al.   GENETICS

Characterization of expression dynamics of WOX homeodomain transcription factors during somatic embryogenesis in Vitis vinifera

(2010) Giorgio Gambino et al.   JOURNAL OF EXPERIMENTAL BOTANY

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Characterization of a ZmSERK gene and its relationship to somatic embryogenesis in a maize culture

(2010) Suzhi Zhang et al.   PLANT CELL TISSUE AND ORGAN CULTURE

ZmPIN1-Mediated Auxin Transport Is Related to Cellular Differentiation during Maize Embryogenesis and Endosperm Development

(2010) C. Forestan et al.   PLANT PHYSIOLOGY

Expression of ZmLEC1 and ZmWRI1 Increases Seed Oil Production in Maize

(2010) B. Shen et al.   PLANT PHYSIOLOGY

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Auxin transport routes in plant development

(2009) J. Petrasek et al.   DEVELOPMENT

The molecular basis for stress-induced acquisition of somatic embryogenesis

(2009) Omid Karami et al.   MOLECULAR BIOLOGY REPORTS

Global Identification of Targets of the Arabidopsis MADS Domain Protein AGAMOUS-Like15

(2009) Y. Zheng et al.   PLANT CELL

A guide to using MapMan to visualize and compare Omics data in plants: a case study in the crop species, Maize

(2009) BJÖRN USADEL et al.   PLANT CELL AND ENVIRONMENT

LEAFY COTYLEDON2 gene expression and auxin treatment in relation to embryogenic capacity of Arabidopsis somatic cells

(2009) Agnieszka Ledwoń et al.   PLANT CELL REPORTS

Auxin-inducedWUSexpression is essential for embryonic stem cell renewal during somatic embryogenesis in Arabidopsis

(2009) Ying H. Su et al.   PLANT JOURNAL

A novel method for induction of plant regeneration via somatic embryogenesis

(2009) Wei Deng et al.   PLANT SCIENCE

The B73 Maize Genome: Complexity, Diversity, and Dynamics

(2009) P. S. Schnable et al.   SCIENCE

The stem cell—Chromatin connection

(2009) Yi Sang et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Artificial chromosome formation in maize (Zea mays L.)

(2008) Evgueni V. Ananiev et al.   CHROMOSOMA

BABY BOOM target genes provide diverse entry points into cell proliferation and cell growth pathways

(2008) Paul Passarinho et al.   PLANT MOLECULAR BIOLOGY

Conifer WOX-related homeodomain transcription factors, developmental consideration and expression dynamic of WOX2 during Picea abies somatic embryogenesis

(2008) Joakim Palovaara et al.   PLANT MOLECULAR BIOLOGY

The MADS-Domain Transcriptional Regulator AGAMOUS-LIKE15 Promotes Somatic Embryo Development in Arabidopsis and Soybean

(2008) D. Thakare et al.   PLANT PHYSIOLOGY

Arabidopsis LEAFY COTYLEDON2 induces maturation traits and auxin activity: Implications for somatic embryogenesis

(2008) S. L. Stone et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

LECs go crazy in embryo development

(2008) S BRAYBROOK et al.   TRENDS IN PLANT SCIENCE