Force Transduction and Lipid Binding in MscL: A Continuum-Molecular Approach

Lipid–protein interactions

(2015) Anthony G. Lee   BIOCHEMICAL SOCIETY TRANSACTIONS

Dynamics of Protein-Protein Interactions at the MscL Periplasmic-Lipid Interface

(2014) Dalian Zhong et al.   BIOPHYSICAL JOURNAL

Importance of Force Decomposition for Local Stress Calculations in Biomembrane Molecular Simulations

(2014) Juan M. Vanegas et al.   Journal of Chemical Theory and Computation

Three-Dimensional Stress Field around a Membrane Protein: Atomistic and Coarse-Grained Simulation Analysis of Gramicidin A

(2013) Jejoong Yoo et al.   BIOPHYSICAL JOURNAL

Structural Basis for Molecular Recognition at Serotonin Receptors

(2013) C. Wang et al.   SCIENCE

Chimeras Reveal a Single Lipid-Interface Residue that Controls MscL Channel Kinetics as well as Mechanosensitivity

(2013) Li-Min Yang et al.   Cell Reports

Hydrophobic mismatch of mobile transmembrane helices: Merging theory and experiments

(2012) Erik Strandberg et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

The determinants of hydrophobic mismatch response for transmembrane helices

(2012) Armando J. de Jesus et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

Sensing and Responding to Membrane Tension: The Bacterial MscL Channel as a Model System

(2012) Irene Iscla et al.   BIOPHYSICAL JOURNAL

The gating mechanism of the bacterial mechanosensitive channel MscL revealed by molecular dynamics simulations

(2012) Yasuyuki Sawada et al.   Channels

Crystal Structure of the Human Two-Pore Domain Potassium Channel K2P1

(2012) A. N. Miller et al.   SCIENCE

Three Routes To Modulate the Pore Size of the MscL Channel/Nanovalve

(2011) Li-Min Yang et al.   ACS Nano

Definition and testing of the GROMOS force-field versions 54A7 and 54B7

(2011) Nathan Schmid et al.   EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS

Mechanosensitive Channels: What Can They Do and How Do They Do It?

(2011) Elizabeth S. Haswell et al.   STRUCTURE

Revisiting Hydrophobic Mismatch with Free Energy Simulation Studies of Transmembrane Helix Tilt and Rotation

(2010) Taehoon Kim et al.   BIOPHYSICAL JOURNAL

g_membed: Efficient insertion of a membrane protein into an equilibrated lipid bilayer with minimal perturbation

(2010) Maarten G. Wolf et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

An improved open-channel structure of MscL determined from FRET confocal microscopy and simulation

(2010) Ben Corry et al.   JOURNAL OF GENERAL PHYSIOLOGY

Hydration properties of mechanosensitive channel pores define the energetics of gating

(2010) A Anishkin et al.   JOURNAL OF PHYSICS-CONDENSED MATTER

Membrane Proteins Diffuse as Dynamic Complexes with Lipids

(2010) Perttu S. Niemelä et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Release of content through mechano-sensitive gates in pressurized liposomes

(2010) M. Louhivuori et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structure of the Human Dopamine D3 Receptor in Complex with a D2/D3 Selective Antagonist

(2010) E. Y. T. Chien et al.   SCIENCE

VORO++: A three-dimensional Voronoi cell library in C++

(2009) Chris H. Rycroft   CHAOS

CHARMM: The biomolecular simulation program

(2009) B. R. Brooks et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

An Improved United Atom Force Field for Simulation of Mixed Lipid Bilayers

(2009) See-Wing Chiu et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Anionic Phospholipids Affect the Rate and Extent of Flux through the Mechanosensitive Channel of Large Conductance MscL†

(2008) Andrew M. Powl et al.   BIOCHEMISTRY

Gating of the Mechanosensitive Channel Protein MscL: The Interplay of Membrane and Protein

(2008) Jonggu Jeon et al.   BIOPHYSICAL JOURNAL

On the Structure of the N-Terminal Domain of the MscL Channel: Helical Bundle or Membrane Interface

(2008) Irene Iscla et al.   BIOPHYSICAL JOURNAL

GROMACS 4:  Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation

(2008) Berk Hess et al.   Journal of Chemical Theory and Computation

CHARMM-GUI: A web-based graphical user interface for CHARMM

(2008) Sunhwan Jo et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Membrane mechanics as a probe of ion-channel gating mechanisms

(2008) Daniel Reeves et al.   PHYSICAL REVIEW E