The Accuracy, Feasibility and Challenges of Sequencing Short Tandem Repeats Using Next-Generation Sequencing Platforms

Sequencing technologies and tools for short tandem repeat variation detection

(2014) M. D. Cao et al.   BRIEFINGS IN BIOINFORMATICS

Characterization of mutations and sequence variants in the D21S11 locus by next generation sequencing

(2013) Eszter Rockenbauer et al.   Forensic Science International-Genetics

Inferring short tandem repeat variation from paired-end short reads

(2013) Minh Duc Cao et al.   NUCLEIC ACIDS RESEARCH

Parallel Tagged Next-Generation Sequencing on Pooled Samples – A New Approach for Population Genetics in Ecology and Conservation

(2013) Monika Zavodna et al.   PLoS One

Short-read, high-throughput sequencing technology for STR genotyping

(2012) Daniel Bornman et al.   BIOTECHNIQUES

Identification of cold-responsive genes in a New Zealand alpine stick insect using RNA-Seq

(2012) Luke T. Dunning et al.   Comparative Biochemistry and Physiology D-Genomics & Proteomics

Forensic STR analysis using massive parallel sequencing

(2012) Christophe Van Neste et al.   Forensic Science International-Genetics

Population-scale analysis of human microsatellites reveals novel sources of exonic variation

(2012) L.J. McIver et al.   GENE

Characterisation of the transcriptome of a wild great tit Parus major population by next generation sequencing

(2011) Anna W Santure et al.   BMC GENOMICS

Accuracy and quality assessment of 454 GS-FLX Titanium pyrosequencing

(2011) André Gilles et al.   BMC GENOMICS

Genome structural variation discovery and genotyping

(2011) Can Alkan et al.   NATURE REVIEWS GENETICS

Design and Implementation of Degenerate Microsatellite Primers for the Mammalian Clade

(2011) Emmanuel Buschiazzo et al.   PLoS One

SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data

(2010) Murray P Cox et al.   BMC BIOINFORMATICS

A 454 multiplex sequencing method for rapid and reliable genotyping of highly polymorphic genes in large-scale studies

(2010) Maxime Galan et al.   BMC GENOMICS

Five-Vertebrate ChIP-seq Reveals the Evolutionary Dynamics of Transcription Factor Binding

(2010) D. Schmidt et al.   SCIENCE

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Fast, cost-effective development of species-specific microsatellite markers by genomic sequencing

(2009) Jawad Abdelkrim et al.   BIOTECHNIQUES

Tandem repeat polymorphisms: modulators of disease susceptibility and candidates for ‘missing heritability’

(2009) Anthony J. Hannan   TRENDS IN GENETICS

Evaluation of next generation sequencing platforms for population targeted sequencing studies

(2009) Olivier Harismendy et al.   GENOME BIOLOGY

High frequency of microsatellites in S. cerevisiae meiotic recombination hotspots

(2008) Andrew TM Bagshaw et al.   BMC GENOMICS

Abundance and length of simple repeats in vertebrate genomes are determined by their structural properties

(2008) A. Bacolla et al.   GENOME RESEARCH