Clinical Application of Estimating Hepatitis B Virus Quasispecies Complexity by Massive Sequencing: Correlation between Natural Evolution and On-Treatment Evolution

EASL Clinical Practice Guidelines: Management of chronic hepatitis B virus infection

(2015)   JOURNAL OF HEPATOLOGY

Inference with viral quasispecies diversity indices: clonal and NGS approaches

(2014) Josep Gregori et al.   BIOINFORMATICS

Ultra-Deep Pyrosequencing (UDPS) Data Treatment to Study Amplicon HCV Minor Variants

(2014) Josep Gregori et al.   PLoS One

Analysis of Ultra-Deep Pyrosequencing and Cloning Based Sequencing of the Basic Core Promoter/Precore/Core Region of Hepatitis B Virus Using Newly Developed Bioinformatics Tools

(2014) Mukhlid Yousif et al.   PLoS One

A comparative study of ultra-deep pyrosequencing and cloning to quantitatively analyze the viral quasispecies using hepatitis B virus infection as a model

(2013) Clara Ramírez et al.   ANTIVIRAL RESEARCH

The ‘Red Queen’ dilemma – running to stay in the same place: reflections on the evolutionary vector of HBV in humans

(2013) Richard S Tedder et al.   ANTIVIRAL THERAPY

Similar evolution of hepatitis B virus quasispecies in patients with incomplete adefovir response receiving tenofovir/emtricitabine combination or tenofovir monotherapy

(2013) Fabien Lavocat et al.   JOURNAL OF HEPATOLOGY

Quasispecies structure, cornerstone of hepatitis B virus infection: Mass sequencing approach

(2013) Francisco Rodriguez-Frias   WORLD JOURNAL OF GASTROENTEROLOGY

Low-Level Persistence of Drug Resistance Mutations in Hepatitis B Virus-Infected Subjects with a Past History of Lamivudine Treatment

(2012) Severine Margeridon-Thermet et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Restored Function of HBV-Specific T Cells After Long-term Effective Therapy With Nucleos(t)ide Analogues

(2012) Carolina Boni et al.   GASTROENTEROLOGY

Cumulative viral evolutionary changes in chronic hepatitis B virus infection precedes hepatitis B e antigen seroconversion

(2012) Yan Cheng et al.   GUT

Increased viral quasispecies evolution in HBeAg seroconverter patients treated with oral nucleoside therapy

(2012) Yan Cheng et al.   JOURNAL OF HEPATOLOGY

Dynamics of Hepatitis B Virus Quasispecies in Association with Nucleos(t)ide Analogue Treatment Determined by Ultra-Deep Sequencing

(2012) Norihiro Nishijima et al.   PLoS One

Ultra-Deep Pyrosequencing Detects Conserved Genomic Sites and Quantifies Linkage of Drug-Resistant Amino Acid Changes in the Hepatitis B Virus Genome

(2012) Francisco Rodriguez-Frías et al.   PLoS One

Quasispecies dynamics in main core epitopes of hepatitis B virus by ultra-deep-pyrosequencing

(2012) Maria Homs   WORLD JOURNAL OF GASTROENTEROLOGY

HBV core region variability: effect of antiviral treatments on main epitopic regions

(2011) Maria Homs et al.   ANTIVIRAL THERAPY

Evolutionary patterns of hepatitis B virus quasispecies under different selective pressures: correlation with antiviral efficacy

(2011) F. Liu et al.   GUT

Ultra-deep pyrosequencing analysis of the hepatitis B virus preCore region and main catalytic motif of the viral polymerase in the same viral genome

(2011) M. Homs et al.   NUCLEIC ACIDS RESEARCH

Genetic Heterogeneity of Hepatitis C Virus in Association with Antiviral Therapy Determined by Ultra-Deep Sequencing

(2011) Akihiro Nasu et al.   PLoS One

Distinct Hepatitis B Virus Dynamics in the Immunotolerant and Early Immunoclearance Phases

(2010) H.-Y. Wang et al.   JOURNAL OF VIROLOGY

Ultra‐Deep Pyrosequencing of Hepatitis B Virus Quasispecies from Nucleoside and Nucleotide Reverse‐Transcriptase Inhibitor (NRTI)–Treated Patients and NRTI‐Naive Patients

(2009) Severine Margeridon‐Thermet et al.   JOURNAL OF INFECTIOUS DISEASES

Use of Massively Parallel Ultradeep Pyrosequencing To Characterize the Genetic Diversity of Hepatitis B Virus in Drug-Resistant and Drug-Naive Patients and To Detect Minor Variants in Reverse Transcriptase and Hepatitis B S Antigen

(2008) M. Solmone et al.   JOURNAL OF VIROLOGY