FindFoci: A Focus Detection Algorithm with Automated Parameter Training That Closely Matches Human Assignments, Reduces Human Inconsistencies and Increases Speed of Analysis

Automated detection of circulating tumor cells with naive Bayesian classifiers

(2014) Carl-Magnus Svensson et al.   CYTOMETRY PART A

Labour-Efficient In Vitro Lymphocyte Population Tracking and Fate Prediction Using Automation and Manual Review

(2014) Rajib Chakravorty et al.   PLoS One

Mitochondrial Morphological Features Are Associated with Fission and Fusion Events

(2014) Laura M. Westrate et al.   PLoS One

Statistical analysis of kinetics, distribution and co-localisation of DNA repair foci in irradiated cells: Cell cycle effect and implications for prediction of radiosensitivity

(2013) Olga A. Martin et al.   DNA REPAIR

Engineering Challenges for Instrumenting and Controlling Integrated Organ-on-Chip Systems

(2013) J. P. Wikswo et al.   IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING

Machine learning in cell biology – teaching computers to recognize phenotypes

(2013) Christoph Sommer et al.   JOURNAL OF CELL SCIENCE

Connectomic reconstruction of the inner plexiform layer in the mouse retina

(2013) Moritz Helmstaedter et al.   NATURE

Detection of γ-H2AX, a Biomarker for DNA Double-strand Breaks, in Urinary Bladders of N-Butyl-N-(4-Hydroxybutyl)-Nitrosamine-Treated Rats

(2013) Takeshi TOYODA et al.   Journal of Toxicologic Pathology

Smc5/6 Coordinates Formation and Resolution of Joint Molecules with Chromosome Morphology to Ensure Meiotic Divisions

(2013) Alice Copsey et al.   PLoS Genetics

Image Analysis and Length Estimation of Biomolecules Using AFM

(2012) A. Sundstrom et al.   IEEE TRANSACTIONS ON INFORMATION TECHNOLOGY IN BIOMEDICINE

Fully automated interpretation of ionizing radiation-induced γH2AX foci by the novel pattern recognition system AKLIDES®

(2012) Roswitha Runge et al.   INTERNATIONAL JOURNAL OF RADIATION BIOLOGY

Machine learning approach for automated screening of malaria parasite using light microscopic images

(2012) Dev Kumar Das et al.   MICRON

NIH Image to ImageJ: 25 years of image analysis

(2012) Caroline A Schneider et al.   NATURE METHODS

Radiation Dose Detection by Imaging Response in Biological Targets

(2012) B. Jakob et al.   RADIATION RESEARCH

A Framework for Image-Based Classification of Mitotic Cells in Asynchronous Populations

(2011) Scott D. Slattery et al.   ASSAY AND DRUG DEVELOPMENT TECHNOLOGIES

Subcellular Location and Molecular Mobility of Human Cytosolic Sulfotransferase 1C1 in Living Human Embryonic Kidney 293 Cells

(2011) J. J. Sheng et al.   DRUG METABOLISM AND DISPOSITION

Spatial Dynamics of DNA Damage Response Protein Foci along the Ion Trajectory of High-LET Particles

(2011) Guanghua Du et al.   RADIATION RESEARCH

Prediction of Cell Penetrating Peptides by Support Vector Machines

(2011) William S. Sanders et al.   PLoS Computational Biology

H2AX phosphorylation at the sites of DNA double-strand breaks in cultivated mammalian cells and tissues

(2011) Denis V. Firsanov et al.   Clinical Epigenetics

Machines that learn to segment images: a crucial technology for connectomics

(2010) Viren Jain et al.   CURRENT OPINION IN NEUROBIOLOGY

Automated detection and quantification of fluorescently labeled synapses in murine brain tissue sections for high throughput applications

(2010) Julia Herold et al.   JOURNAL OF BIOTECHNOLOGY

Spatially explicit predictions of blood parasites in a widely distributed African rainforest bird

(2010) R. N. M. Sehgal et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Computational Prediction and Experimental Assessment of Secreted/Surface Proteins from Mycobacterium tuberculosis H37Rv

(2010) Carolina Vizcaíno et al.   PLoS Computational Biology

H2AX: functional roles and potential applications

(2009) Jennifer S. Dickey et al.   CHROMOSOMA

Computational analysis of the number, area and density of γ-H2AX foci in breast cancer cells exposed to111In-DTPA-hEGF or γ-rays using Image-J software

(2009) Zhongli Cai et al.   INTERNATIONAL JOURNAL OF RADIATION BIOLOGY

Automatic identification and clustering of chromosome phenotypes in a genome wide RNAi screen by time-lapse imaging

(2009) Thomas Walter et al.   JOURNAL OF STRUCTURAL BIOLOGY

The synaptonemal complex protein, Zip1, promotes the segregation of nonexchange chromosomes at meiosis I

(2009) L. Newnham et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Mitochondrial Protein Compendium Elucidates Complex I Disease Biology

(2008) David J. Pagliarini et al.   CELL

Systematic Definition of Protein Constituents along the Major Polarization Axis Reveals an Adaptive Reuse of the Polarization Machinery in Pheromone-Treated Budding Yeast

(2008) Rammohan Narayanaswamy et al.   JOURNAL OF PROTEOME RESEARCH