Illumina Amplicon Sequencing of 16S rRNA Tag Reveals Bacterial Community Development in the Rhizosphere of Apple Nurseries at a Replant Disease Site and a New Planting Site

Pyrosequencing technology reveals the impact of different manure doses on the bacterial community in apple rhizosphere soil

(2014) Jian Sun et al.   APPLIED SOIL ECOLOGY

Changes in the soil nutrient levels, enzyme activities, microbial community function, and structure during apple orchard maturation

(2014) Xun Qian et al.   APPLIED SOIL ECOLOGY

16S rDNA Pyrosequencing Analysis of Bacterial Community in Heavy Metals Polluted Soils

(2014) Marcin Gołębiewski et al.   MICROBIAL ECOLOGY

Relationship between root-endophytic microbial communities and replant disease in specialized apple growing areas in Europe

(2013) L.M. Manici et al.   APPLIED SOIL ECOLOGY

Growth rate of fine root systems influences rootstock tolerance to replant disease

(2013) Amaya Atucha et al.   PLANT AND SOIL

Manure Refinement Affects Apple Rhizosphere Bacterial Community Structure: A Study in Sandy Soil

(2013) Qiang Zhang et al.   PLoS One

Apple Replant Disease: Role of Microbial Ecology in Cause and Control

(2012) Mark Mazzola et al.   Annual Review of Phytopathology

Mechanisms of biocontrol and plant growth-promoting activity in soil bacterial species ofBacillusandPseudomonas: a review

(2012) Gustavo Santoyo et al.   BIOCONTROL SCIENCE AND TECHNOLOGY

Kribbella endophytica sp. nov., an endophytic actinobacterium isolated from the surface-sterilized leaf of a native apricot tree

(2012) O. Kaewkla et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Bioactive natural products from Lysobacter

(2012) Yunxuan Xie et al.   NATURAL PRODUCT REPORTS

Evaluation of apple replant problems based on different soil disinfection treatments—links to soil microbial community structure?

(2012) Bunlong Yim et al.   PLANT AND SOIL

Correlations between Root-Associated Microorganisms and Peach Replant Disease Symptoms in a California Soil

(2012) Jiue-in Yang et al.   PLoS One

Bacterial diversity in the rhizosphere of maize and the surrounding carbonate-rich bulk soil

(2012) Adela García-Salamanca et al.   Microbial Biotechnology

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Kribbella amoyensis sp. nov., isolated from rhizosphere soil of a pharmaceutical plant, Typhonium giganteum Engl.

(2011) Z. Xu et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Chthonomonas calidirosea gen. nov., sp. nov., an aerobic, pigmented, thermophilic micro-organism of a novel bacterial class, Chthonomonadetes classis nov., of the newly described phylum Armatimonadetes originally designated candidate division OP10

(2010) K. C.- Y. Lee et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Pyrosequencing reveals highly diverse and species-specific microbial communities in sponges from the Red Sea

(2010) On On Lee et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Rootstock genotype succession influences apple replant disease and root-zone microbial community composition in an orchard soil

(2010) Angelika St. Laurent et al.   PLANT AND SOIL

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Culture-independent molecular techniques for soil microbial ecology

(2010) Penny R. Hirsch et al.   SOIL BIOLOGY & BIOCHEMISTRY

New tools for discovering and characterizing microbial diversity

(2008) Erick Cardenas et al.   CURRENT OPINION IN BIOTECHNOLOGY