Integrated Pathway Clusters with Coherent Biological Themes for Target Prioritisation

HCV Infection Selectively Impairs Type I but Not Type III IFN Signaling

(2013) Partha K. Chandra et al.   AMERICAN JOURNAL OF PATHOLOGY

IntPath--an integrated pathway gene relationship database for model organisms and important pathogens

(2013) Hufeng Zhou et al.   BMC Systems Biology

Understanding the Biological Context of NS5A–Host Interactions in HCV Infection: A Network-Based Approach

(2013) Lokesh P. Tripathi et al.   JOURNAL OF PROTEOME RESEARCH

IPAD: the Integrated Pathway Analysis Database for Systematic Enrichment Analysis

(2012) Fan Zhang et al.   BMC BIOINFORMATICS

Pathway Distiller - multisource biological pathway consolidation

(2012) Mark S Doderer et al.   BMC GENOMICS

Inhibitory Roles of Signal Transducer and Activator of Transcription 3 in Antitumor Immunity during Carcinogen-Induced Lung Tumorigenesis

(2012) S. Ihara et al.   CANCER RESEARCH

Proteomic Analysis of Hepatitis C Virus (HCV) Core Protein Transfection and Host Regulator PA28γ Knockout in HCV Pathogenesis: A Network-Based Study

(2012) Lokesh P. Tripathi et al.   JOURNAL OF PROTEOME RESEARCH

Critical assessment of human metabolic pathway databases: a stepping stone for future integration

(2011) Miranda D Stobbe et al.   BMC Systems Biology

hiPathDB: a human-integrated pathway database with facile visualization

(2011) N. Yu et al.   NUCLEIC ACIDS RESEARCH

TargetMine, an Integrated Data Warehouse for Candidate Gene Prioritisation and Target Discovery

(2011) Yi-An Chen et al.   PLoS One

Consistency, comprehensiveness, and compatibility of pathway databases

(2010) Donny Soh et al.   BMC BIOINFORMATICS

Complement Factor H Autoantibodies Are Associated with Early Stage NSCLC

(2010) N. Amornsiripanitch et al.   CLINICAL CANCER RESEARCH

HPD: an online integrated human pathway database enabling systems biology studies

(2009) Sudhir R Chowbina et al.   BMC BIOINFORMATICS

How does multiple testing correction work?

(2009) William S Noble   NATURE BIOTECHNOLOGY

Semantic Similarity in Biomedical Ontologies

(2009) Catia Pesquita et al.   PLoS Computational Biology

Metrics for GO based protein semantic similarity: a systematic evaluation

(2008) Catia Pesquita et al.   BMC BIOINFORMATICS

PID: the Pathway Interaction Database

(2008) Carl F. Schaefer et al.   NUCLEIC ACIDS RESEARCH

Reactome knowledgebase of human biological pathways and processes

(2008) L. Matthews et al.   NUCLEIC ACIDS RESEARCH