Evaluation of Toxicogenomics Approaches for Assessing the Risk of Nongenotoxic Carcinogenicity in Rat Liver

InCroMAP: integrated analysis of cross-platform microarray and pathway data

(2012) C. Wrzodek et al.   BIOINFORMATICS

The sva package for removing batch effects and other unwanted variation in high-throughput experiments

(2012) Jeffrey T. Leek et al.   BIOINFORMATICS

A Decade of Toxicogenomic Research and Its Contribution to Toxicological Science

(2012) Minjun Chen et al.   TOXICOLOGICAL SCIENCES

Gel-based proteomics of liver cancer progression in rat

(2011) Jakob Albrethsen et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

ABC Transporters, Bile Acids, and Inflammatory Stress in Liver Cancer

(2011) Renxue Wang et al.   CURRENT PHARMACEUTICAL BIOTECHNOLOGY

Removing Batch Effects in Analysis of Expression Microarray Data: An Evaluation of Six Batch Adjustment Methods

(2011) Chao Chen et al.   PLoS One

Prediction model of potential hepatocarcinogenicity of rat hepatocarcinogens using a large-scale toxicogenomics database

(2011) Takeki Uehara et al.   TOXICOLOGY AND APPLIED PHARMACOLOGY

Stable feature selection for biomarker discovery

(2010) Zengyou He et al.   COMPUTATIONAL BIOLOGY AND CHEMISTRY

Histone Deacetylase Inhibitor Valproic Acid Inhibits Cancer Cell Proliferation via Down-regulation of the Alzheimer Amyloid Precursor Protein

(2010) Vivek Venkataramani et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The Evolution of Bioinformatics in Toxicology: Advancing Toxicogenomics

(2010) C. A. Afshari et al.   TOXICOLOGICAL SCIENCES

Robust biomarker identification for cancer diagnosis with ensemble feature selection methods

(2009) Thomas Abeel et al.   BIOINFORMATICS

PH Domain-Only Protein PHLDA3 Is a p53-Regulated Repressor of Akt

(2009) Tatsuya Kawase et al.   CELL

The Japanese toxicogenomics project: Application of toxicogenomics

(2009) Takeki Uehara et al.   MOLECULAR NUTRITION & FOOD RESEARCH

Predicting the hepatocarcinogenic potential of alkenylbenzene flavoring agents using toxicogenomics and machine learning

(2009) Scott S. Auerbach et al.   TOXICOLOGY AND APPLIED PHARMACOLOGY

Genotoxicity and morphological changes induced by the alkaloid monocrotaline, extracted from Crotalaria retusa, in a model of glial cells

(2009) J.P. Silva-Neto et al.   TOXICON

Pyruvate kinase M2 is a phosphotyrosine-binding protein

(2008) Heather R. Christofk et al.   NATURE

A toxicogenomics approach for early assessment of potential non-genotoxic hepatocarcinogenicity of chemicals in rats

(2008) Takeki Uehara et al.   TOXICOLOGY

Prediction of a carcinogenic potential of rat hepatocarcinogens using toxicogenomics analysis of short-term in vivo studies

(2007) Heidrun Ellinger-Ziegelbauer et al.   MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS