Fast Principal Component Analysis of Large-Scale Genome-Wide Data

A Lasso multi-marker mixed model for association mapping with population structure correction

(2012) Barbara Rakitsch et al.   BIOINFORMATICS

Sparse Principal Component Analysis for Identifying Ancestry-Informative Markers in Genome-Wide Association Studies

(2012) Seokho Lee et al.   GENETIC EPIDEMIOLOGY

Dense genotyping identifies and localizes multiple common and rare variant association signals in celiac disease

(2011) Gosia Trynka et al.   NATURE GENETICS

FaST linear mixed models for genome-wide association studies

(2011) Christoph Lippert et al.   NATURE METHODS

An Algorithm for the Principal Component Analysis of Large Data Sets

(2011) Nathan Halko et al.   SIAM JOURNAL ON SCIENTIFIC COMPUTING

Finding Structure with Randomness: Probabilistic Algorithms for Constructing Approximate Matrix Decompositions

(2011) N. Halko et al.   SIAM REVIEW

varLD: a program for quantifying variation in linkage disequilibrium patterns between populations

(2010) R. T. H. Ong et al.   BIOINFORMATICS

Integrating common and rare genetic variation in diverse human populations

(2010)   NATURE

On Consistency and Sparsity for Principal Components Analysis in High Dimensions

(2009) Iain M. Johnstone et al.   JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION

Common Genetic Variation and the Control of HIV-1 in Humans

(2009) Jacques Fellay et al.   PLoS Genetics

Genes mirror geography within Europe

(2008) John Novembre et al.   NATURE