Growth Promotion-Related miRNAs in Oncidium Orchid Roots Colonized by the Endophytic Fungus Piriformospora indica

Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)

(2012) She Tang et al.   BMC PLANT BIOLOGY

A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis

(2012) M.-A. Dillies et al.   BRIEFINGS IN BIOINFORMATICS

Small RNAs in development – insights from plants

(2012) Xuemei Chen   CURRENT OPINION IN GENETICS & DEVELOPMENT

Argonautes compete for miR165/166 to regulate shoot apical meristem development

(2012) Zhonghui Zhang et al.   CURRENT OPINION IN PLANT BIOLOGY

Exploring the evolutionary differences of SBP-box genes targeted by miR156 and miR529 in plants

(2012) Li-Zhen Ling et al.   GENETICA

Identification of microRNA-like RNAs in a plant pathogenic fungus Sclerotinia sclerotiorum by high-throughput sequencing

(2012) Jiahong Zhou et al.   MOLECULAR GENETICS AND GENOMICS

The Mutualistic Fungus Piriformospora indica Colonizes Arabidopsis Roots by Inducing an Endoplasmic Reticulum Stress-Triggered Caspase-Dependent Cell Death

(2012) X. Qiang et al.   PLANT CELL

Genome-wide identification of microRNAs in larch and stage-specific modulation of 11 conserved microRNAs and their targets during somatic embryogenesis

(2012) Junhong Zhang et al.   PLANTA

Methylation effect on chalcone synthase gene expression determines anthocyanin pigmentation in floral tissues of two Oncidium orchid cultivars

(2012) Xiao-Jing Liu et al.   PLANTA

Ethylene Supports Colonization of Plant Roots by the Mutualistic Fungus Piriformospora indica

(2012) Behnam Khatabi et al.   PLoS One

Functions of microRNAs in plant stress responses

(2012) Ramanjulu Sunkar et al.   TRENDS IN PLANT SCIENCE

Plant Small RNAs: Biogenesis, Mode of Action and Their Roles in Abiotic Stresses

(2012) Praveen Guleria et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Sculpting the meristem: The roles of miRNAs in plant stem cells

(2011) Cong-Ying Wang et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Role of miRNAs and siRNAs in biotic and abiotic stress responses of plants

(2011) Basel Khraiwesh et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Piriformospora indica-a mutualistic basidiomycete with an exceptionally large plant host range

(2011) XIAOYU QIANG et al.   MOLECULAR PLANT PATHOLOGY

Growth Promotion of Chinese Cabbage andArabidopsisbyPiriformospora indicaIs Not Stimulated by Mycelium-Synthesized Auxin

(2011) Yin-Chen Lee et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Characterization of Oncidium ‘Gower Ramsey’ Transcriptomes using 454 GS-FLX Pyrosequencing and Their Application to the Identification of Genes Associated with Flowering Time

(2011) Yu-Yun Chang et al.   PLANT AND CELL PHYSIOLOGY

Evolution and Functional Diversification ofMIRNAGenes

(2011) Josh T. Cuperus et al.   PLANT CELL

MicroRNAs as regulators of root development and architecture

(2011) Ghazanfar A. Khan et al.   PLANT MOLECULAR BIOLOGY

Stars and Symbiosis: MicroRNA- and MicroRNA*-Mediated Transcript Cleavage Involved in Arbuscular Mycorrhizal Symbiosis

(2011) E. A. Devers et al.   PLANT PHYSIOLOGY

Broad-Spectrum Suppression of Innate Immunity Is Required for Colonization of Arabidopsis Roots by the Fungus Piriformospora indica

(2011) S. Jacobs et al.   PLANT PHYSIOLOGY

Genome-Wide Identification, Characterization and Phylogenetic Analysis of the Rice LRR-Kinases

(2011) Xinli Sun et al.   PLoS One

Sequencing-Based Approaches Reveal Low Ambient Temperature-Responsive and Tissue-Specific MicroRNAs in Phalaenopsis Orchid

(2011) Feng-Ming An et al.   PLoS One

MicroRNA Expression and Regulation in Human, Chimpanzee, and Macaque Brains

(2011) Hai Yang Hu et al.   PLoS Genetics

Endophytic Life Strategies Decoded by Genome and Transcriptome Analyses of the Mutualistic Root Symbiont Piriformospora indica

(2011) Alga Zuccaro et al.   PLoS Pathogens

NB-LRR proteins: pairs, pieces, perception, partners, and pathways

(2010) Timothy K Eitas et al.   CURRENT OPINION IN PLANT BIOLOGY

A Phosphate Transporter from the Root Endophytic FungusPiriformospora indicaPlays a Role in Phosphate Transport to the Host Plant

(2010) Vikas Yadav et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Expression Pattern Suggests a Role of MiR399 in the Regulation of the Cellular Response to Local Pi Increase During Arbuscular Mycorrhizal Symbiosis

(2010) Anja Branscheid et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Ethylene signalling and ethylene-targeted transcription factors are required to balance beneficial and nonbeneficial traits in the symbiosis between the endophytic fungus Piriformospora indica and Arabidopsis thaliana

(2010) Iris Camehl et al.   NEW PHYTOLOGIST

Differential expression of carotenoid-related genes determines diversified carotenoid coloration in floral tissues of Oncidium cultivars

(2010) Chung-Yi Chiou et al.   PLANTA

Origin, Biogenesis, and Activity of Plant MicroRNAs

(2009) Olivier Voinnet   CELL

Four Orchid (Oncidium Gower Ramsey) AP1/AGL9-like MADS Box Genes Show Novel Expression Patterns and Cause Different Effects on Floral Transition and Formation in Arabidopsis thaliana

(2009) Yu-Yun Chang et al.   PLANT AND CELL PHYSIOLOGY

Functional Analysis of FT and TFL1 Orthologs from Orchid (Oncidium Gower Ramsey) that Regulate the Vegetative to Reproductive Transition

(2009) C.-J. Hou et al.   PLANT AND CELL PHYSIOLOGY

Genome-Wide Medicago truncatula Small RNA Analysis Revealed Novel MicroRNAs and Isoforms Differentially Regulated in Roots and Nodules

(2009) C. Lelandais-Briere et al.   PLANT CELL

Manipulation of plant innate immunity and gibberellin as factor of compatibility in the mutualistic association of barley roots withPiriformospora indica

(2009) Patrick Schäfer et al.   PLANT JOURNAL

MicroRNAs in the Rhizobia Legume Symbiosis

(2009) S. A. Simon et al.   PLANT PHYSIOLOGY

Evolution of F-box genes in plants: Different modes of sequence divergence and their relationships with functional diversification

(2009) Guixia Xu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sorting of Drosophila small silencing RNAs partitions microRNA* strands into the RNA interference pathway

(2009) M. Ghildiyal et al.   RNA

Micropropagation of orchids: A review on the potential of different explants

(2009) Samira Chugh et al.   SCIENTIA HORTICULTURAE

Characterization and promoter activity of chromoplast specific carotenoid associated gene (CHRC) from Oncidium Gower Ramsey

(2008) Chung-Yi Chiou et al.   BIOTECHNOLOGY LETTERS

High-throughput sequencing of Medicago truncatula short RNAs identifies eight new miRNA families

(2008) Gyorgy Szittya et al.   BMC GENOMICS

Novel and nodulation-regulated microRNAs in soybean roots

(2008) Senthil Subramanian et al.   BMC GENOMICS

Specificity of ARGONAUTE7-miR390 Interaction and Dual Functionality in TAS3 Trans-Acting siRNA Formation

(2008) Taiowa A. Montgomery et al.   CELL

DELLAs Control Plant Immune Responses by Modulating the Balance of Jasmonic Acid and Salicylic Acid Signaling

(2008) Lionel Navarro et al.   CURRENT BIOLOGY

MicroRNA-mediated Systemic Down-regulation of Copper Protein Expression in Response to Low Copper Availability inArabidopsis

(2008) Salah E. Abdel-Ghany et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The Role of Auxins and Cytokinins in the Mutualistic Interaction BetweenArabidopsisandPiriformospora indica

(2008) Jyothilakshmi Vadassery et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Salt tolerance of barley induced by the root endophytePiriformospora indicais associated with a strong increase in antioxidants

(2008) Helmut Baltruschat et al.   NEW PHYTOLOGIST

Characterization and expression profiles of miRNAs in rice seeds

(2008) Liang-Jiao Xue et al.   NUCLEIC ACIDS RESEARCH

Systemic Resistance in Arabidopsis Conferred by the Mycorrhizal Fungus Piriformospora indica Requires Jasmonic Acid Signaling and the Cytoplasmic Function of NPR1

(2008) Elke Stein et al.   PLANT AND CELL PHYSIOLOGY

The Arabidopsis NFYA5 Transcription Factor Is Regulated Transcriptionally and Posttranscriptionally to Promote Drought Resistance

(2008) W.-X. Li et al.   PLANT CELL

Carbohydrate mobilization and gene regulatory profile in the pseudobulb of Oncidium orchid during the flowering process

(2008) Chih-Yu Wang et al.   PLANTA