Towards Decrypting Cryptobiosis—Analyzing Anhydrobiosis in the Tardigrade Milnesium tardigradum Using Transcriptome Sequencing
Published 2014 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Towards Decrypting Cryptobiosis—Analyzing Anhydrobiosis in the Tardigrade Milnesium tardigradum Using Transcriptome Sequencing
Authors
Keywords
-
Journal
PLoS One
Volume 9, Issue 3, Pages e92663
Publisher
Public Library of Science (PLoS)
Online
2014-03-21
DOI
10.1371/journal.pone.0092663
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- De Novo Transcriptome Sequence Assembly and Analysis of RNA Silencing Genes of Nicotiana benthamiana
- (2013) Kenlee Nakasugi et al. PLoS One
- Improving transcriptome assembly through error correction of high-throughput sequence reads
- (2013) Matthew D. MacManes et al. PeerJ
- A statistical approach to selecting and confirming validation targets in -omics experiments
- (2012) Jeffrey T Leek et al. BMC BIOINFORMATICS
- Multiple functionally divergent and conserved copies of alpha tubulin in bdelloid rotifers
- (2012) Isobel Eyres et al. BMC EVOLUTIONARY BIOLOGY
- A catalogue of putative unique transcripts from Douglas-fir (Pseudotsuga menziesii) based on 454 transcriptome sequencing of genetically diverse, drought stressed seedlings
- (2012) Thomas Müller et al. BMC GENOMICS
- Transcriptome of the adult female malaria mosquito vector Anopheles albimanus
- (2012) Jesús Martínez-Barnetche et al. BMC GENOMICS
- Integrated pathway modules using time-course metabolic profiles and EST data from Milnesium tardigradum
- (2012) Daniela Beisser et al. BMC Systems Biology
- Molecular mechanisms of desiccation tolerance in the resurrection glacial relic Haberlea rhodopensis
- (2012) Tsanko S. Gechev et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- Ensembl 2013
- (2012) Paul Flicek et al. NUCLEIC ACIDS RESEARCH
- The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
- (2012) Christian Quast et al. NUCLEIC ACIDS RESEARCH
- Two Novel Heat-Soluble Protein Families Abundantly Expressed in an Anhydrobiotic Tardigrade
- (2012) Ayami Yamaguchi et al. PLoS One
- Evaluating de Bruijn Graph Assemblers on 454 Transcriptomic Data
- (2012) Xianwen Ren et al. PLoS One
- Abscisic Acid Refines the Synthesis of Chloroplast Proteins in Maize (Zea mays) in Response to Drought and Light
- (2012) Xiuli Hu et al. PLoS One
- Survival in extreme environments - on the current knowledge of adaptations in tardigrades
- (2011) N. Møbjerg et al. Acta Physiologica
- Landscape of Next-Generation Sequencing Technologies
- (2011) Thomas P. Niedringhaus et al. ANALYTICAL CHEMISTRY
- Comparison of the two major classes of assembly algorithms: overlap-layout-consensus and de-bruijn-graph
- (2011) Z. Li et al. Briefings in Functional Genomics
- Anhydrobiosis in bacteria: From physiology to applications
- (2011) Armando Hernández García JOURNAL OF BIOSCIENCES
- Anhydrobiosis in tardigrades—The last decade
- (2011) Weronika Wełnicz et al. JOURNAL OF INSECT PHYSIOLOGY
- cDNA representational difference analysis for identifying transcripts regulated under anhydrobiosis in the tardigrade Milnesium tardigradum
- (2011) Markus A. Grohme et al. JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH
- An integrated semiconductor device enabling non-optical genome sequencing
- (2011) Jonathan M. Rothberg et al. NATURE
- Sequence-specific error profile of Illumina sequencers
- (2011) Kensuke Nakamura et al. NUCLEIC ACIDS RESEARCH
- MicroRNAs and phylogenomics resolve the relationships of Tardigrada and suggest that velvet worms are the sister group of Arthropoda
- (2011) L. I. Campbell et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Complex and dynamic landscape of RNA polyadenylation revealed by PAS-Seq
- (2011) P. J. Shepard et al. RNA
- The Structure of the Eukaryotic Ribosome at 3.0 A Resolution
- (2011) A. Ben-Shem et al. SCIENCE
- Correction of sequencing errors in a mixed set of reads
- (2010) L. Salmela BIOINFORMATICS
- Reptile: representative tiling for short read error correction
- (2010) X. Yang et al. BIOINFORMATICS
- Transcriptome survey of the anhydrobiotic tardigrade Milnesium tardigradum in comparison with Hypsibius dujardini and Richtersius coronifer
- (2010) Brahim Mali et al. BMC GENOMICS
- Comparing de novo assemblers for 454 transcriptome data
- (2010) Sujai Kumar et al. BMC GENOMICS
- Expression of heat shock protein-coding genes associated with anhydrobiosis in an African chironomid Polypedilum vanderplanki
- (2010) Oleg Gusev et al. CELL STRESS & CHAPERONES
- EvoPipes.net: Bioinformatic Tools for Ecological and Evolutionary Genomics
- (2010) Michael S. Barker et al. Evolutionary Bioinformatics
- Stampy: A statistical algorithm for sensitive and fast mapping of Illumina sequence reads
- (2010) G. Lunter et al. GENOME RESEARCH
- Identification of Anhydrobiosis-related Genes from an Expressed Sequence Tag Database in the Cryptobiotic MidgePolypedilum vanderplanki(Diptera; Chironomidae)
- (2010) Richard Cornette et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Proteomic Analysis of Tardigrades: Towards a Better Understanding of Molecular Mechanisms by Anhydrobiotic Organisms
- (2010) Elham Schokraie et al. PLoS One
- Differential expression analysis for sequence count data
- (2010) Simon Anders et al. GENOME BIOLOGY
- RNA-Seq gene expression estimation with read mapping uncertainty
- (2009) Bo Li et al. BIOINFORMATICS
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- BLAST+: architecture and applications
- (2009) Christiam Camacho et al. BMC BIOINFORMATICS
- Tardigrade workbench: comparing stress-related proteins, sequence-similar and functional protein clusters as well as RNA elements in tardigrades
- (2009) Frank Förster et al. BMC GENOMICS
- Desiccation survival in an Antarctic nematode: molecular analysis using expressed sequenced tags
- (2009) Bishwo N Adhikari et al. BMC GENOMICS
- Heat shock proteins and resistance to desiccation in congeneric land snails
- (2009) Tal Mizrahi et al. CELL STRESS & CHAPERONES
- Stress response in tardigrades: differential gene expression of molecular chaperones
- (2009) Andy Reuner et al. CELL STRESS & CHAPERONES
- ABySS: A parallel assembler for short read sequence data
- (2009) J. T. Simpson et al. GENOME RESEARCH
- Survival and DNA degradation in anhydrobiotic tardigrades
- (2009) L. Rebecchi et al. JOURNAL OF EXPERIMENTAL BIOLOGY
- High‐Temperature Tolerance in Anhydrobiotic Tardigrades Is Limited by Glass Transition
- (2009) S. Hengherr et al. PHYSIOLOGICAL AND BIOCHEMICAL ZOOLOGY
- Tardigrades survive exposure to space in low Earth orbit
- (2008) K. Ingemar Jönsson et al. CURRENT BIOLOGY
- Mapping short DNA sequencing reads and calling variants using mapping quality scores
- (2008) H. Li et al. GENOME RESEARCH
- Effect of high hydrostatic pressure on to life of the tiny animal tardigrade
- (2008) F. Ono et al. JOURNAL OF PHYSICS AND CHEMISTRY OF SOLIDS
- Mapping and quantifying mammalian transcriptomes by RNA-Seq
- (2008) Ali Mortazavi et al. NATURE METHODS
- Metabolism and regulation of canonical histone mRNAs: life without a poly(A) tail
- (2008) William F. Marzluff et al. NATURE REVIEWS GENETICS
- High-throughput functional annotation and data mining with the Blast2GO suite
- (2008) S. Gotz et al. NUCLEIC ACIDS RESEARCH
- FlyBase: enhancing Drosophila Gene Ontology annotations
- (2008) S. Tweedie et al. NUCLEIC ACIDS RESEARCH
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now