Diversity and Spatial Structure of Belowground Plant–Fungal Symbiosis in a Mixed Subtropical Forest of Ectomycorrhizal and Arbuscular Mycorrhizal Plants

Global sampling of plant roots expands the described molecular diversity of arbuscular mycorrhizal fungi

(2013) Maarja Öpik et al.   MYCORRHIZA

Functional analysis of the novel mycorrhiza-specific phosphate transporter AsPT1 and PHT1 family fromAstragalus sinicusduring the arbuscular mycorrhizal symbiosis

(2013) Xianan Xie et al.   NEW PHYTOLOGIST

Fungal community analysis by high-throughput sequencing of amplified markers - a user's guide

(2013) Björn D. Lindahl et al.   NEW PHYTOLOGIST

Combined phosphate and nitrogen limitation generates a nutrient stress transcriptome favorable for arbuscular mycorrhizal symbiosis inMedicago truncatula

(2013) Laurent Bonneau et al.   NEW PHYTOLOGIST

The mycorrhizal-associated nutrient economy: a new framework for predicting carbon-nutrient couplings in temperate forests

(2013) Richard P. Phillips et al.   NEW PHYTOLOGIST

Forest Age and Plant Species Composition Determine the Soil Fungal Community Composition in a Chinese Subtropical Forest

(2013) Yu Ting Wu et al.   PLoS One

Two New Computational Methods for Universal DNA Barcoding: A Benchmark Using Barcode Sequences of Bacteria, Archaea, Animals, Fungi, and Land Plants

(2013) Akifumi S. Tanabe et al.   PLoS One

Sharing of Diverse Mycorrhizal and Root-Endophytic Fungi among Plant Species in an Oak-Dominated Cool–Temperate Forest

(2013) Hirokazu Toju et al.   PLoS One

How are plant and fungal communities linked to each other in belowground ecosystems? A massively parallel pyrosequencing analysis of the association specificity of root-associated fungi and their host plants

(2013) Hirokazu Toju et al.   Ecology and Evolution

Community composition of root-associated fungi in aQuercus-dominated temperate forest: “codominance” of mycorrhizal and root-endophytic fungi

(2013) Hirokazu Toju et al.   Ecology and Evolution

Ultrafast clustering algorithms for metagenomic sequence analysis

(2012) W. Li et al.   BRIEFINGS IN BIOINFORMATICS

Towards global patterns in the diversity and community structure of ectomycorrhizal fungi

(2012) LEHO TEDERSOO et al.   MOLECULAR ECOLOGY

Root endophyte interaction between ectomycorrhizal basidiomycete Tricholoma matsutake and arbuscular mycorrhizal tree Cedrela odorata, allowing in vitro synthesis of rhizospheric “shiro”

(2012) Hitoshi Murata et al.   MYCORRHIZA

On the application of network theory to arbuscular mycorrhizal fungi-plant interactions: the importance of basic assumptions

(2012) Tancredi Caruso et al.   NEW PHYTOLOGIST

Structural and functional interactions between extraradical mycelia of ectomycorrhizal Pisolithus isolates

(2012) Bingyun Wu et al.   NEW PHYTOLOGIST

The network structure of plant-arbuscular mycorrhizal fungi

(2012) A. Montesinos-Navarro et al.   NEW PHYTOLOGIST

Mycorrhizal fungal establishment in agricultural soils: factors determining inoculation success

(2012) Erik Verbruggen et al.   NEW PHYTOLOGIST

High-Coverage ITS Primers for the DNA-Based Identification of Ascomycetes and Basidiomycetes in Environmental Samples

(2012) Hirokazu Toju et al.   PLoS One

Carbon availability triggers fungal nitrogen uptake and transport in arbuscular mycorrhizal symbiosis

(2012) C. R. Fellbaum et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Roles of Arbuscular Mycorrhizas in Plant Nutrition and Growth: New Paradigms from Cellular to Ecosystem Scales

(2011) Sally E. Smith et al.   Annual Review of Plant Biology

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

A novel statistical method for classifying habitat generalists and specialists

(2011) Robin L. Chazdon et al.   ECOLOGY

A meta-analysis of plant responses to dark septate root endophytes

(2011) K. K. Newsham   NEW PHYTOLOGIST

Deep RNA sequencing improved the structural annotation of the Tuber melanosporum transcriptome

(2011) E. Tisserant et al.   NEW PHYTOLOGIST

Towards standardization of the description and publication of next-generation sequencing datasets of fungal communities

(2011) R. Henrik Nilsson et al.   NEW PHYTOLOGIST

Reciprocal Rewards Stabilize Cooperation in the Mycorrhizal Symbiosis

(2011) E. T. Kiers et al.   SCIENCE

Using null models to disentangle variation in community dissimilarity from variation in α-diversity

(2011) Jonathan M. Chase et al.   Ecosphere

A single European aspen (Populus tremula) tree individual may potentially harbour dozens of Cenococcum geophilum ITS genotypes and hundreds of species of ectomycorrhizal fungi

(2010) Mohammad Bahram et al.   FEMS MICROBIOLOGY ECOLOGY

Massively parallel 454-sequencing of fungal communities inQuercusspp. ectomycorrhizas indicates seasonal dynamics in urban and rural sites

(2010) ARI JUMPPONEN et al.   MOLECULAR ECOLOGY

Ectomycorrhizal fungi and interspecific competition: species interactions, community structure, coexistence mechanisms, and future research directions

(2010) Peter Kennedy   NEW PHYTOLOGIST

The online database MaarjAM reveals global and ecosystemic distribution patterns in arbuscular mycorrhizal fungi (Glomeromycota)

(2010) M. Öpik et al.   NEW PHYTOLOGIST

454 Pyrosequencing and Sanger sequencing of tropical mycorrhizal fungi provide similar results but reveal substantial methodological biases

(2010) Leho Tedersoo et al.   NEW PHYTOLOGIST

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates

(2009) Victor Kunin et al.   ENVIRONMENTAL MICROBIOLOGY

Ectomycorrhizal lifestyle in fungi: global diversity, distribution, and evolution of phylogenetic lineages

(2009) Leho Tedersoo et al.   MYCORRHIZA

Potential link between plant and fungal distributions in a dipterocarp rainforest: community and phylogenetic structure of tropical ectomycorrhizal fungi across a plant and soil ecotone

(2009) Kabir G. Peay et al.   NEW PHYTOLOGIST

Patterns in root trait variation among 25 co-existing North American forest species

(2009) L. H. Comas et al.   NEW PHYTOLOGIST

Large-scale parallel 454 sequencing reveals host ecological group specificity of arbuscular mycorrhizal fungi in a boreonemoral forest

(2009) M. Öpik et al.   NEW PHYTOLOGIST

Mycorrhizal associations and other means of nutrition of vascular plants: understanding the global diversity of host plants by resolving conflicting information and developing reliable means of diagnosis

(2009) Mark C. Brundrett   PLANT AND SOIL

Reproductive isolation among cryptic species in the ectomycorrhizal genus Strobilomyces: Population-level CAPS marker-based genetic analysis

(2008) Hirotoshi Sato et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Dual mycorrhizal colonization of forest-dominating tropical trees and the mycorrhizal status of non-dominant tree and liana species

(2008) K. L. McGuire et al.   MYCORRHIZA

Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex

(2008) Micah Hamady et al.   NATURE METHODS