A Genome-Wide Perspective of miRNAome in Response to High Temperature, Salinity and Drought Stresses in Brassica juncea (Czern) L

Identification of miRNAs and their targets using high-throughput sequencing and degradome analysis in cytoplasmic male-sterile and its maintainer fertile lines of brassica juncea

(2013) Jinghua Yang et al.   BMC GENOMICS

miR394 and LCR are involved in Arabidopsis salt and drought stress responses in an abscisic acid-dependent manner

(2013) Jian Song et al.   BMC PLANT BIOLOGY

Biogenesis, Turnover, and Mode of Action of Plant MicroRNAs

(2013) K. Rogers et al.   PLANT CELL

Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels

(2012) Marcel H. Schulz et al.   BIOINFORMATICS

The UEA sRNA workbench: a suite of tools for analysing and visualizing next generation sequencing microRNA and small RNA datasets

(2012) M. B. Stocks et al.   BIOINFORMATICS

Identification of miRNAs and their targets from Brassica napus by high-throughput sequencing and degradome analysis

(2012) Miao Y Xu et al.   BMC GENOMICS

Identification and profiling of novel microRNAs in the Brassica rapa genome based on small RNA deep sequencing

(2012) Bumjin Kim et al.   BMC PLANT BIOLOGY

Small RNAs in development – insights from plants

(2012) Xuemei Chen   CURRENT OPINION IN GENETICS & DEVELOPMENT

Identification and characterization of microRNAs and their target genes in Brassica oleracea

(2012) Jinyan Wang et al.   GENE

Genome-wide identification of Brassica napus microRNAs and their targets in response to cadmium

(2012) Zhao Sheng Zhou et al.   JOURNAL OF EXPERIMENTAL BOTANY

Identification and profiling of arsenic stress-induced microRNAs inBrassica juncea

(2012) Sudhakar Srivastava et al.   JOURNAL OF EXPERIMENTAL BOTANY

Drought, salt, and temperature stress-induced metabolic rearrangements and regulatory networks

(2012) J. Krasensky et al.   JOURNAL OF EXPERIMENTAL BOTANY

High-throughput sequencing discovery of conserved and novel microRNAs in Chinese cabbage (Brassica rapa L. ssp. pekinensis)

(2012) Fengde Wang et al.   MOLECULAR GENETICS AND GENOMICS

Overexpression of an Arabidopsis β-glucosidase gene enhances drought resistance with dwarf phenotype in creeping bentgrass

(2012) Yun-Jeong Han et al.   PLANT CELL REPORTS

Gradual Increase of miR156 Regulates Temporal Expression Changes of Numerous Genes during Leaf Development in Rice

(2012) K. Xie et al.   PLANT PHYSIOLOGY

Tissue-Specific Silencing of Arabidopsis SU(VAR)3-9 HOMOLOG8 by miR171a

(2012) P. A. Manavella et al.   PLANT PHYSIOLOGY

Identification of Differentially-Expressed Genes Associated with Pistil Abortion in Japanese Apricot by Genome-Wide Transcriptional Analysis

(2012) Ting Shi et al.   PLoS One

Identifying Conserved and Novel MicroRNAs in Developing Seeds of Brassica napus Using Deep Sequencing

(2012) Ana Paula Körbes et al.   PLoS One

QTL mapping of yield-associated traits in Brassica juncea: meta-analysis and epistatic interactions using two different crosses between east European and Indian gene pool lines

(2012) Satish Kumar Yadava et al.   THEORETICAL AND APPLIED GENETICS

Functions of microRNAs in plant stress responses

(2012) Ramanjulu Sunkar et al.   TRENDS IN PLANT SCIENCE

Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing

(2011) Qing-Xin Song et al.   BMC PLANT BIOLOGY

A vacuole localized β-glucosidase contributes to drought tolerance in Arabidopsis

(2011) PengTao Wang et al.   CHINESE SCIENCE BULLETIN

Identification of conserved and novel microRNAs that are responsive to heat stress in Brassica rapa

(2011) Xiang Yu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Identification of miRNAs and Their Target Genes Using Deep Sequencing and Degradome Analysis in Trifoliate Orange [Poncirus trifoliate (L.) Raf]

(2011) Jin-Zhi Zhang et al.   MOLECULAR BIOTECHNOLOGY

Arabidopsis Argonaute 2 Regulates Innate Immunity via miRNA393∗-Mediated Silencing of a Golgi-Localized SNARE Gene, MEMB12

(2011) Xiaoming Zhang et al.   MOLECULAR CELL

psRNATarget: a plant small RNA target analysis server

(2011) Xinbin Dai et al.   NUCLEIC ACIDS RESEARCH

Genome-wide identification of Medicago truncatula microRNAs and their targets reveals their differential regulation by heavy metal

(2011) ZHAO SHENG ZHOU et al.   PLANT CELL AND ENVIRONMENT

Small RNA Profiling in Two Brassica napus Cultivars Identifies MicroRNAs with Oil Production- and Development-Correlated Expression and New Small RNA Classes

(2011) Y.-T. Zhao et al.   PLANT PHYSIOLOGY

Salt-induced stress responses of Brassica (Brassica junceaL.) genotypes

(2011) Sandip A. Ghuge et al.   Archives of Agronomy and Soil Science

Regulation of flowering time and floral patterning by miR172

(2010) Qian-Hao Zhu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Many ways to generate microRNA-like small RNAs: non-canonical pathways for microRNA production

(2010) Keita Miyoshi et al.   MOLECULAR GENETICS AND GENOMICS

Identification and analysis of seven H2O2-responsive miRNAs and 32 new miRNAs in the seedlings of rice (Oryza sativa L. ssp. indica)

(2010) Tian Li et al.   NUCLEIC ACIDS RESEARCH

miRBase: integrating microRNA annotation and deep-sequencing data

(2010) A. Kozomara et al.   NUCLEIC ACIDS RESEARCH

A set of miRNAs from Brassica napus in response to sulphate deficiency and cadmium stress

(2010) Si Qi Huang et al.   PLANT BIOTECHNOLOGY JOURNAL

microRNA-directed cleavage and translational repression of the copper chaperone for superoxide dismutase mRNA in Arabidopsis

(2010) Linda Beauclair et al.   PLANT JOURNAL

Bacteria-responsive microRNAs regulate plant innate immunity by modulating plant hormone networks

(2010) Weixiong Zhang et al.   PLANT MOLECULAR BIOLOGY

Identification of MicroRNAs Involved in Pathogen-Associated Molecular Pattern-Triggered Plant Innate Immunity

(2010) Y. Li et al.   PLANT PHYSIOLOGY

Regulation of Plant Glycine Decarboxylase by S-Nitrosylation and Glutathionylation

(2010) M. C. Palmieri et al.   PLANT PHYSIOLOGY

Nitrate-responsive miR393/AFB3 regulatory module controls root system architecture in Arabidopsis thaliana

(2010) E. A. Vidal et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Small RNAs and Their Roles in Plant Development

(2009) Xuemei Chen   Annual Review of Cell and Developmental Biology

miR156-Regulated SPL Transcription Factors Define an Endogenous Flowering Pathway in Arabidopsis thaliana

(2009) Jia-Wei Wang et al.   CELL

The Sequential Action of miR156 and miR172 Regulates Developmental Timing in Arabidopsis

(2009) Gang Wu et al.   CELL

Small RNAs and developmental timing in plants

(2009) R Scott Poethig   CURRENT OPINION IN GENETICS & DEVELOPMENT

Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis

(2009) Dov Moldovan et al.   JOURNAL OF EXPERIMENTAL BOTANY

UV-B-responsive microRNAs in Populus tremula

(2009) Xiaoyun Jia et al.   JOURNAL OF PLANT PHYSIOLOGY

Differential and dynamic regulation of miR398 in response to ABA and salt stress in Populus tremula and Arabidopsis thaliana

(2009) Xiaoyun Jia et al.   PLANT MOLECULAR BIOLOGY

Identification of Nutrient-Responsive Arabidopsis and Rapeseed MicroRNAs by Comprehensive Real-Time Polymerase Chain Reaction Profiling and Small RNA Sequencing

(2009) B. D. Pant et al.   PLANT PHYSIOLOGY

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

Abiotic stress and ABA-inducible Group 4 LEA from Brassica napus plays a key role in salt and drought tolerance

(2008) Monika Dalal et al.   JOURNAL OF BIOTECHNOLOGY

The Arabidopsis NFYA5 Transcription Factor Is Regulated Transcriptionally and Posttranscriptionally to Promote Drought Resistance

(2008) W.-X. Li et al.   PLANT CELL

Sulphur starvation induces the expression of microRNA-395 and one of its target genes but in different cell types

(2008) Cintia Goulart Kawashima et al.   PLANT JOURNAL

Towards salinity tolerance in Brassica: an overview

(2008) Ram Singh Purty et al.   PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS