De Novo Assembly of a Transcriptome for Calanus finmarchicus (Crustacea, Copepoda) – The Dominant Zooplankter of the North Atlantic Ocean

Peptidergic signaling in Calanus finmarchicus (Crustacea, Copepoda): In silico identification of putative peptide hormones and their receptors using a de novo assembled transcriptome

(2013) Andrew E. Christie et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Gene expression of the marine copepod Calanus finmarchicus: Responses to small-scale environmental variation in the Gulf of Maine (NW Atlantic Ocean)

(2013) E. Unal et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

Sequencing and De Novo Assembly of the Western Tarnished Plant Bug (Lygus hesperus) Transcriptome

(2013) J. Joe Hull et al.   PLoS One

Transcriptome Sequencing and De Novo Analysis of the Copepod Calanus sinicus Using 454 GS FLX

(2013) Juan Ning et al.   PLoS One

Acute exposure of water soluble fractions of marine diesel on Arctic Calanus glacialis and boreal Calanus finmarchicus: Effects on survival and biomarker response

(2013) Bjørn Henrik Hansen et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Comparative description of ten transcriptomes of newly sequenced invertebrates and efficiency estimation of genomic sampling in non-model taxa

(2012) Ana Riesgo et al.   Frontiers in Zoology

Emerging roles for specific fatty acids in developmental processes

(2012) T. L. Vrablik et al.   GENES & DEVELOPMENT

Transcript profiling reveals mechanisms for lipid conservation during diapause in the mosquito, Aedes albopictus

(2012) Julie A. Reynolds et al.   JOURNAL OF INSECT PHYSIOLOGY

Estimating the consumption ofCalanus finmarchicusby planktivorous fish in the Norwegian Sea using a fully coupled 3D model system

(2012) Kjell Rong Utne et al.   Marine Biology Research

Convergent Evolution of Sodium Ion Selectivity in Metazoan Neuronal Signaling

(2012) Maya Gur Barzilai et al.   Cell Reports

A new view of insect–crustacean relationships I. Inferences from neural cladistics and comparative neuroanatomy

(2011) Nicholas J. Strausfeld et al.   ARTHROPOD STRUCTURE & DEVELOPMENT

Evolutionary view of acyl-CoA diacylglycerol acyltransferase (DGAT), a key enzyme in neutral lipid biosynthesis

(2011) Andreia C Turchetto-Zolet et al.   BMC EVOLUTIONARY BIOLOGY

De novo assembly and characterization of a maternal and developmental transcriptome for the emerging model crustacean Parhyale hawaiensis

(2011) Victor Zeng et al.   BMC GENOMICS

Observing copepods through a genomic lens

(2011) James E Bron et al.   Frontiers in Zoology

Molecular characterization and functional expression of the DSC1 channel

(2011) Tianxiang Zhang et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

Heat shock protein expression during stress and diapause in the marine copepod Calanus finmarchicus

(2011) Amalia M. Aruda et al.   JOURNAL OF INSECT PHYSIOLOGY

Modelling the timing and duration of dormancy in populations of Calanus finmarchicus from the Northwest Atlantic shelf

(2011) F. Maps et al.   JOURNAL OF PLANKTON RESEARCH

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Biodiversity and Ecosystem Function in the Gulf of Maine: Pattern and Role of Zooplankton and Pelagic Nekton

(2011) Catherine L. Johnson et al.   PLoS One

Transcriptomics of a Giant Freshwater Prawn (Macrobrachium rosenbergii): De Novo Assembly, Annotation and Marker Discovery

(2011) Hyungtaek Jung et al.   PLoS One

The Ecoresponsive Genome of Daphnia pulex

(2011) J. K. Colbourne et al.   SCIENCE

A length-structured partial ecosystem model for cod in the North Sea

(2010) D.C. Speirs et al.   FISHERIES RESEARCH

Distribution of C-type allatostatin (C-AST)-like immunoreactivity in the central nervous system of the copepod Calanus finmarchicus

(2010) Caroline H. Wilson et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Explaining regional variability in copepod recruitment: Implications for a changing climate

(2010) A.B. Neuheimer et al.   PROGRESS IN OCEANOGRAPHY

Embryonic diapause highlighted by differential expression of mRNAs for ecdysteroidogenesis, transcription and lipid sparing in the cricket Allonemobius socius

(2009) J. A. Reynolds et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Transcription profiling and regulation of fat metabolism genes in diapausing adults of the mosquito Culex pipiens

(2009) Cheolho Sim et al.   PHYSIOLOGICAL GENOMICS

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Distribution of pigment dispersing hormone- and tachykinin-related peptides in the central nervous system of the copepod crustacean Calanus finmarchicus

(2008) Gregory L. Sousa et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Differential gene expression in diapausing and active Calanus finmarchicus (Copepoda)

(2008) AM Tarrant et al.   MARINE ECOLOGY PROGRESS SERIES

Effects of naphthalene on gene transcription in Calanus finmarchicus (Crustacea: Copepoda)

(2007) Bjørn Henrik Hansen et al.   AQUATIC TOXICOLOGY

Identification of A-type allatostatins possessing −YXFGI/Vamide carboxy-termini from the nervous system of the copepod crustacean Calanus finmarchicus

(2007) Andrew E. Christie et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY