In Search of Pathogens: Transcriptome-Based Identification of Viral Sequences from the Pine Processionary Moth (Thaumetopoea pityocampa)

Comparative analysis of two phenologically divergent populations of the pine processionary moth (Thaumetopoea pityocampa) by de novo transcriptome sequencing

(2014) Bernhard Gschloessl et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

Lymantria dispar iflavirus 1 (LdIV1), a new model to study iflaviral persistence in lepidopterans

(2014) J. Carrillo-Tripp et al.   JOURNAL OF GENERAL VIROLOGY

Simultaneous occurrence of covert infections with small RNA viruses in the lepidopteran Spodoptera exigua

(2014) Agata K. Jakubowska et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

Identification of a Novel Rhabdovirus in Spodoptera frugiperda Cell Lines

(2014) H. Ma et al.   JOURNAL OF VIROLOGY

Genetic Characterization of a Novel Iflavirus Associated with Vomiting Disease in the Chinese Oak Silkmoth Antheraea pernyi

(2014) Peng Geng et al.   PLoS One

A Comparison of Next Generation Sequencing Technologies for Transcriptome Assembly and Utility for RNA-Seq in a Non-Model Bird

(2014) Findley R. Finseth et al.   PLoS One

The Subread aligner: fast, accurate and scalable read mapping by seed-and-vote

(2013) Yang Liao et al.   NUCLEIC ACIDS RESEARCH

Assessing Species Distribution Using Google Street View: A Pilot Study with the Pine Processionary Moth

(2013) Jérôme Rousselet et al.   PLoS One

The transcriptome of Spodoptera exigua larvae exposed to different types of microbes

(2012) Laura Pascual et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

Bayesian Phylogenetics with BEAUti and the BEAST 1.7

(2012) Alexei J. Drummond et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phylogeny, integration and expression of sigma virus-like genes in Drosophila

(2012) Matthew J. Ballinger et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Application of High-Throughput DNA Sequencing in Phytopathology

(2011) David J. Studholme et al.   Annual Review of Phytopathology

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Evolutionary maintenance of filovirus-like genes in bat genomes

(2011) Derek J Taylor et al.   BMC EVOLUTIONARY BIOLOGY

Fossil Rhabdoviral Sequences Integrated into Arthropod Genomes: Ontogeny, Evolution, and Potential Functionality

(2011) P. Fort et al.   MOLECULAR BIOLOGY AND EVOLUTION

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Replication of Varroa destructor virus 1 (VDV-1) and a Varroa destructor virus 1–deformed wing virus recombinant (VDV-1–DWV) in the head of the honey bee

(2011) Naama Zioni et al.   VIROLOGY

Deep sequencing of Cotesia vestalis bracovirus reveals the complexity of a polydnavirus genome

(2011) Ya-feng Chen et al.   VIROLOGY

Next Generation Sequencing Technologies for Insect Virus Discovery

(2011) Sijun Liu et al.   Viruses-Basel

An Insect Nidovirus Emerging from a Primary Tropical Rainforest

(2011) F. Zirkel et al.   mBio

Host Phylogeny Determines Viral Persistence and Replication in Novel Hosts

(2011) Ben Longdon et al.   PLoS Pathogens

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

Why Does Insect RNA Look Degraded?

(2010) Eva C. Winnebeck et al.   JOURNAL OF INSECT SCIENCE

Molecular Characterization and Virulence of Beauveria spp. from the Pine Processionary Moth, Thaumetopoea pityocampa (Lepidoptera: Thaumetopoeidae)

(2010) Ali Sevim et al.   MYCOPATHOLOGIA

Virus discovery by deep sequencing and assembly of virus-derived small silencing RNAs

(2010) Q. Wu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Endogenous Viral Elements in Animal Genomes

(2010) Aris Katzourakis et al.   PLoS Genetics

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

The evolution of novel fungal genes from non-retroviral RNA viruses

(2009) Derek J Taylor et al.   BMC BIOLOGY

The rhabdoviruses: Biodiversity, phylogenetics, and evolution☆

(2009) I.V. Kuzmin et al.   INFECTION GENETICS AND EVOLUTION

A historical review of managed honey bee populations in Europe and the United States and the factors that may affect them

(2009) Dennis vanEngelsdorp et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

Sigma viruses from three species of Drosophila form a major new clade in the rhabdovirus phylogeny

(2009) B. Longdon et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Economic assessment of managing processionary moth in pine forests: A case-study in Portugal

(2008) Paola Gatto et al.   JOURNAL OF ENVIRONMENTAL MANAGEMENT

Genome Analysis of a Glossina pallidipes Salivary Gland Hypertrophy Virus Reveals a Novel, Large, Double-Stranded Circular DNA Virus

(2008) A. M. M. Abd-Alla et al.   JOURNAL OF VIROLOGY