Not as Ubiquitous as We Thought: Taxonomic Crypsis, Hidden Diversity and Cryptic Speciation in the Cosmopolitan Fungus Thelonectria discophora (Nectriaceae, Hypocreales, Ascomycota)

Phenotypically similar but ecologically distinct: differences in competitive ability and predation risk among amphipods

(2013) Rickey D. Cothran et al.   OIKOS

Concatenation and Concordance in the Reconstruction of Mouse Lemur Phylogeny: An Empirical Demonstration of the Effect of Allele Sampling in Phylogenetics

(2012) David W. Weisrock et al.   MOLECULAR BIOLOGY AND EVOLUTION

Bayesian Phylogenetics with BEAUti and the BEAST 1.7

(2012) Alexei J. Drummond et al.   MOLECULAR BIOLOGY AND EVOLUTION

Modelling the global distribution of fungal species: new insights into microbial cosmopolitanism

(2012) Hirotoshi Sato et al.   MOLECULAR ECOLOGY

Restricted distribution and limited gene flow in the model ciliateTetrahymena thermophila

(2012) Rebecca A. Zufall et al.   MOLECULAR ECOLOGY

Incomplete lineage sorting or secondary admixture: disentangling historical divergence from recent gene flow in the Vinous-throated parrotbill (Paradoxornis webbianus)

(2012) Yanhua Qu et al.   MOLECULAR ECOLOGY

Multigene phylogenetic analyses of the Thelonectria coronata and T. veuillotiana species complexes

(2012) Catalina Salgado-Salazar et al.   MYCOLOGIA

A monograph of Allantonectria, Nectria, and Pleonectria (Nectriaceae, Hypocreales, Ascomycota) and their pycnidial, sporodochial, and synnematous anamorphs

(2012) Y. Hirooka et al.   STUDIES IN MYCOLOGY

The Fungi: 1, 2, 3 … 5.1 million species?

(2011) Meredith Blackwell   AMERICAN JOURNAL OF BOTANY

Kin discrimination and possible cryptic species in the social amoeba Polysphondylium violaceum

(2011) Sara E Kalla et al.   BMC EVOLUTIONARY BIOLOGY

Applying IUCN red-listing criteria for assessing and reporting on the conservation status of fungal species

(2011) Anders Dahlberg et al.   Fungal Ecology

Complex patterns of speciation in cosmopolitan “rock posy” lichens – Discovering and delimiting cryptic fungal species in the lichen-forming Rhizoplaca melanophthalma species-complex (Lecanoraceae, Ascomycota)

(2011) Steven D. Leavitt et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Species Delimitation in Taxonomically Difficult Fungi: The Case of Hymenogaster

(2011) Benjamin Stielow et al.   PLoS One

A morphological and phylogenetic revision of the Nectria cinnabarina species complex

(2011) Y. Hirooka et al.   STUDIES IN MYCOLOGY

Delimitation of Neonectria and Cylindrocarpon (Nectriaceae, Hypocreales, Ascomycota) and related genera with Cylindrocarpon-like anamorphs

(2011) P. Chaverri et al.   STUDIES IN MYCOLOGY

A Species Tree for the Australo-Papuan Fairy-wrens and Allies (Aves: Maluridae)

(2011) June Y. Lee et al.   SYSTEMATIC BIOLOGY

How to describe a new fungal species

(2011) Keith A. Seifert et al.   IMA Fungus

BUCKy: Gene tree/species tree reconciliation with Bayesian concordance analysis

(2010) Bret R. Larget et al.   BIOINFORMATICS

Environmental distribution of prokaryotic taxa

(2010) Javier Tamames et al.   BMC MICROBIOLOGY

No biogeographical pattern for a root-associated fungal species complex

(2010) Valentin Queloz et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Multilocus species identification and fungal DNA barcoding: insights from blue stain fungal symbionts of the mountain pine beetle

(2010) AMANDA D. ROE et al.   Molecular Ecology Resources

Not every fungus is everywhere: scaling to the biogeography of fungal-plant interactions across roots, shoots and ecosystems

(2010) Kabir G. Peay et al.   NEW PHYTOLOGIST

GUIDANCE: a web server for assessing alignment confidence scores

(2010) O. Penn et al.   NUCLEIC ACIDS RESEARCH

Dispersal of fungal spores on a cooperatively generated wind

(2010) Marcus Roper et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multigene phylogeny and mating tests reveal three cryptic species related to Calonectria pauciramosa

(2010) L. Lombard et al.   STUDIES IN MYCOLOGY

The Accuracy of Species Tree Estimation under Simulation: A Comparison of Methods

(2010) Adam D. Leaché et al.   SYSTEMATIC BIOLOGY

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Species delimitation and evolution of metal bioaccumulation in the lichenizedAcarospora smaragdula(Ascomycota, Fungi) complex

(2009) Mats Wedin et al.   CLADISTICS

Bayesian Inference of Species Trees from Multilocus Data

(2009) J. Heled et al.   MOLECULAR BIOLOGY AND EVOLUTION

Species Trees from Highly Incongruent Gene Trees in Rice

(2009) Karen A. Cranston et al.   SYSTEMATIC BIOLOGY

Recent developments in the MAFFT multiple sequence alignment program

(2008) K. Katoh et al.   BRIEFINGS IN BIOINFORMATICS

Population Evidence of Cryptic Species and Geographical Structure in the Cosmopolitan Ectomycorrhizal Fungus, Tricholoma scalpturatum

(2008) Fabian Carriconde et al.   MICROBIAL ECOLOGY

jModelTest: Phylogenetic Model Averaging

(2008) D. Posada   MOLECULAR BIOLOGY AND EVOLUTION

Explosively launched spores of ascomycete fungi have drag-minimizing shapes

(2008) M. Roper et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Testing Congruence in Phylogenomic Analysis

(2008) Jessica W. Leigh et al.   SYSTEMATIC BIOLOGY