Transcriptome Characterisation of the Ant Formica exsecta with New Insights into the Evolution of Desaturase Genes in Social Hymenoptera

Colony take-over and brood survival in temporary social parasites of the ant genus Formica

(2013) Anton Chernenko et al.   BEHAVIORAL ECOLOGY AND SOCIOBIOLOGY

A Y-like social chromosome causes alternative colony organization in fire ants

(2013) John Wang et al.   NATURE

Distribution of Mound-Building Ant Species (Formicaspp., Hymenoptera) in Finland: Preliminary Results of a National Survey

(2012) Pekka Punttila et al.   ANNALES ZOOLOGICI FENNICI

Genomic and Morphological Evidence Converge to Resolve the Enigma of Strepsiptera

(2012) Oliver Niehuis et al.   CURRENT BIOLOGY

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Evaluating Characteristics of De Novo Assembly Software on 454 Transcriptome Data: A Simulation Approach

(2012) Marvin Mundry et al.   PLoS One

Weak patriline effects are present in the cuticular hydrocarbon profiles of isolated Formica exsecta ants but they disappear in the colony environment

(2012) Stephen Martin et al.   Ecology and Evolution

Genetic diversity, colony chemical phenotype, and nest mate recognition in the ant Formica fusca

(2011) Heikki Helanterä et al.   BEHAVIORAL ECOLOGY

Sequencing and characterization of the guppy (Poecilia reticulata) transcriptome

(2011) Bonnie A Fraser et al.   BMC GENOMICS

Characterisation of the transcriptome of a wild great tit Parus major population by next generation sequencing

(2011) Anna W Santure et al.   BMC GENOMICS

Transcriptome characterization and polymorphism detection between subspecies of big sagebrush (Artemisia tridentata)

(2011) Prabin Bajgain et al.   BMC GENOMICS

Experimental evidence for mediation of competition by habitat succession

(2011) H. Gibb   ECOLOGY

The genome of the leaf-cutting antAcromyrmex echinatiorsuggests key adaptations to advanced social life and fungus farming

(2011) Sanne Nygaard et al.   GENOME RESEARCH

Reproductive conflicts in polyandrous and polygynous antFormica sanguinea

(2011) K. HAAPANIEMI et al.   MOLECULAR ECOLOGY

Next-generation transcriptome assembly

(2011) Jeffrey A. Martin et al.   NATURE REVIEWS GENETICS

FlyBase 101 - the basics of navigating FlyBase

(2011) P. McQuilton et al.   NUCLEIC ACIDS RESEARCH

KEGG for integration and interpretation of large-scale molecular data sets

(2011) M. Kanehisa et al.   NUCLEIC ACIDS RESEARCH

The genome of the fire ant Solenopsis invicta

(2011) Y. Wurm et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Draft genome of the red harvester ant Pogonomyrmex barbatus

(2011) C. R. Smith et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Genome Sequence of the Leaf-Cutter Ant Atta cephalotes Reveals Insights into Its Obligate Symbiotic Lifestyle

(2011) Garret Suen et al.   PLoS Genetics

Manipulation of FASTQ data with Galaxy

(2010) D. Blankenberg et al.   BIOINFORMATICS

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

A garter snake transcriptome: pyrosequencing, de novo assembly, and sex-specific differences

(2010) Tonia S Schwartz et al.   BMC GENOMICS

Comparing de novo assemblers for 454 transcriptome data

(2010) Sujai Kumar et al.   BMC GENOMICS

Blending of heritable recognition cues among ant nestmates creates distinct colony gestalt odours but prevents within-colony nepotism

(2010) J. S. Van ZWEDEN et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Hymenoptera Genome Database: integrated community resources for insect species of the order Hymenoptera

(2010) M. C. Munoz-Torres et al.   NUCLEIC ACIDS RESEARCH

GUIDANCE: a web server for assessing alignment confidence scores

(2010) O. Penn et al.   NUCLEIC ACIDS RESEARCH

TranslatorX: multiple alignment of nucleotide sequences guided by amino acid translations

(2010) Federico Abascal et al.   NUCLEIC ACIDS RESEARCH

Genomic Comparison of the Ants Camponotus floridanus and Harpegnathos saltator

(2010) R. Bonasio et al.   SCIENCE

VarScan: variant detection in massively parallel sequencing of individual and pooled samples

(2009) Daniel C. Koboldt et al.   BIOINFORMATICS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

(2009) A. M. Waterhouse et al.   BIOINFORMATICS

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Rapidly developing functional genomics in ecological model systems via 454 transcriptome sequencing

(2008) Christopher W. Wheat   GENETICA

On the scent of speciation: the chemosensory system and its role in premating isolation

(2008) C Smadja et al.   HEREDITY

Stay or drift? Queen acceptance in the ant Formica paralugubris

(2008) B. Holzer et al.   INSECTES SOCIAUX

Organic mound-building ants: their impact on soil properties in temperate and boreal forests

(2008) M. F. Jurgensen et al.   JOURNAL OF APPLIED ENTOMOLOGY

Colony-specific Hydrocarbons Identify Nest Mates in Two Species of Formica Ant

(2008) Stephen J. Martin et al.   JOURNAL OF CHEMICAL ECOLOGY

jModelTest: Phylogenetic Model Averaging

(2008) D. Posada   MOLECULAR BIOLOGY AND EVOLUTION

Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing

(2008) J. CRISTOBAL VERA et al.   MOLECULAR ECOLOGY

GP-9s Are Ubiquitous Proteins Unlikely Involved in Olfactory Mediation of Social Organization in the Red Imported Fire Ant, Solenopsis invicta

(2008) Walter S. Leal et al.   PLoS One

Chemical basis of nest-mate discrimination in the ant Formica exsecta

(2008) S. J Martin et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Analysis of transcriptome data in the red flour beetle, Tribolium castaneum

(2007) Yoonseong Park et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY