Reconstructing the Timing and Dispersion Routes of HIV-1 Subtype B Epidemics in The Caribbean and Central America: A Phylogenetic Story

Phylogenetic and demographic characterization of HIV-1 transmission in Madrid, Spain

(2013) Gonzalo Yebra et al.   INFECTION GENETICS AND EVOLUTION

HIV Type 1 Genetic Diversity in Newly Diagnosed Cuban Patients

(2011) Liuber Y. Machado et al.   AIDS RESEARCH AND HUMAN RETROVIRUSES

Most HIV Type 1 Non-B Infections in the Spanish Cohort of Antiretroviral Treatment-Naive HIV-Infected Patients (CoRIS) Are Due to Recombinant Viruses

(2011) G. Yebra et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Inconsistencies in Estimating the Age of HIV-1 Subtypes Due to Heterotachy

(2011) J. O. Wertheim et al.   MOLECULAR BIOLOGY AND EVOLUTION

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

The evolution of HIV: Inferences using phylogenetics

(2011) Eduardo Castro-Nallar et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Drug Resistance Prevalence in Human Immunodeficiency Virus Type 1 Infected Pediatric Populations in Honduras and El Salvador During 1989–2009

(2011) África Holguín et al.   PEDIATRIC INFECTIOUS DISEASE JOURNAL

HIV-1 Molecular Epidemiology in Guinea-Bissau, West Africa: Origin, Demography and Migrations

(2011) Joakim Esbjörnsson et al.   PLoS One

Reviewing the History of HIV-1: Spread of Subtype B in the Americas

(2011) Dennis Maletich Junqueira et al.   PLoS One

The Relatedness of HIV Epidemics in the United States–Mexico Border Region

(2010) Sanjay R. Mehta et al.   AIDS RESEARCH AND HUMAN RETROVIRUSES

Long-Term Evolution of the Luteoviridae: Time Scale and Mode of Virus Speciation

(2010) I. Pagan et al.   JOURNAL OF VIROLOGY

Dynamics of Two Separate but Linked HIV-1 CRF01_AE Outbreaks among Injection Drug Users in Stockholm, Sweden, and Helsinki, Finland

(2010) H. Skar et al.   JOURNAL OF VIROLOGY

The HIV-1 Subtype C Epidemic in South America Is Linked to the United Kingdom

(2010) Tulio de Oliveira et al.   PLoS One

Analysis of HIV-1 pol sequences from Panama: Identification of phylogenetic clusters within subtype B and detection of antiretroviral drug resistance mutations☆

(2009) Sara Ahumada-Ruiz et al.   INFECTION GENETICS AND EVOLUTION

Demonstration of Sustained Drug-Resistant Human Immunodeficiency Virus Type 1 Lineages Circulating among Treatment-Naive Individuals

(2009) S. Hue et al.   JOURNAL OF VIROLOGY

Evolutionary analysis of the dynamics of viral infectious disease

(2009) Oliver G. Pybus et al.   NATURE REVIEWS GENETICS

Bayesian Phylogeography Finds Its Roots

(2009) Philippe Lemey et al.   PLoS Computational Biology

Molecular Phylodynamics of the Heterosexual HIV Epidemic in the United Kingdom

(2009) Gareth J. Hughes et al.   PLoS Pathogens

Mexico's Evolving HIV Epidemic

(2008) Steffanie A. Strathdee   JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION

Global epidemiology of injecting drug use and HIV among people who inject drugs: a systematic review

(2008) Bradley M Mathers et al.   LANCET

jModelTest: Phylogenetic Model Averaging

(2008) D. Posada   MOLECULAR BIOLOGY AND EVOLUTION

High-Resolution Molecular Epidemiology and Evolutionary History of HIV-1 Subtypes in Albania

(2008) Marco Salemi et al.   PLoS One

Conservation Patterns of HIV-1 RT Connection and RNase H Domains: Identification of New Mutations in NRTI-Treated Patients

(2008) André F. A. Santos et al.   PLoS One

The epidemiology of AIDS in Haiti refutes the claims of Gilbert et al.

(2008) J. W. Pape et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Correlating viral phenotypes with phylogeny: Accounting for phylogenetic uncertainty

(2007) Joe Parker et al.   INFECTION GENETICS AND EVOLUTION