PhenoTimer: Software for the Visual Mapping of Time-Resolved Phenotypic Landscapes

Arena3D: visualizing time-driven phenotypic differences in biological systems

(2012) Maria Secrier et al.   BMC BIOINFORMATICS

Whole transcriptome analysis of the hippocampus: toward a molecular portrait of epileptogenesis

(2012) Oswaldo K Okamoto et al.   BMC GENOMICS

Ensembl 2013

(2012) Paul Flicek et al.   NUCLEIC ACIDS RESEARCH

TVNViewer: An interactive visualization tool for exploring networks that change over time or space

(2011) R. E. Curtis et al.   BIOINFORMATICS

Identification and validation of bioactive small molecule target through phenotypic screening

(2011) Yoon Sun Cho et al.   BIOORGANIC & MEDICINAL CHEMISTRY

A phenotypic screen to identify hypertrophy-modulating microRNAs in primary cardiomyocytes

(2011) Claudia Jentzsch et al.   JOURNAL OF MOLECULAR AND CELLULAR CARDIOLOGY

Reorganizing the protein space at the Universal Protein Resource (UniProt)

(2011)   NUCLEIC ACIDS RESEARCH

Database resources of the National Center for Biotechnology Information

(2011) E. W. Sayers et al.   NUCLEIC ACIDS RESEARCH

An RNA Interference Phenotypic Screen Identifies a Role for FGF Signals in Colon Cancer Progression

(2011) Marc Leushacke et al.   PLoS One

Phenotypic profiling of the human genome by time-lapse microscopy reveals cell division genes

(2010) Beate Neumann et al.   NATURE

ChIP-Seq identification of weakly conserved heart enhancers

(2010) Matthew J Blow et al.   NATURE GENETICS

The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function

(2010) David Warde-Farley et al.   NUCLEIC ACIDS RESEARCH

The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored

(2010) D. Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

GeneCards Version 3: the human gene integrator

(2010) M. Safran et al.   Database-The Journal of Biological Databases and Curation

High Content Phenotypic Cell-Based Visual Screen Identifies Mycobacterium tuberculosis Acyltrehalose-Containing Glycolipids Involved in Phagosome Remodeling

(2010) Priscille Brodin et al.   PLoS Pathogens

The dissection of transcriptional modules regulated by various drugs of abuse in the mouse striatum

(2010) Marcin Piechota et al.   GENOME BIOLOGY

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

Cyclebase.org: version 2.0, an updated comprehensive, multi-species repository of cell cycle experiments and derived analysis results

(2009) Nicholas Paul Gauthier et al.   NUCLEIC ACIDS RESEARCH

VistaClara: an expression browser plug-in for Cytoscape

(2008) R. Kincaid et al.   BIOINFORMATICS

Arena3D: visualization of biological networks in 3D

(2008) Georgios A Pavlopoulos et al.   BMC Systems Biology

iPath: interactive exploration of biochemical pathways and networks

(2008) Ivica Letunic et al.   TRENDS IN BIOCHEMICAL SCIENCES

GeneMANIA: a real-time multiple association network integration algorithm for predicting gene function

(2008) Sara Mostafavi et al.   GENOME BIOLOGY