Comparative Genomic Analysis Indicates that Niche Adaptation of Terrestrial Flavobacteria Is Strongly Linked to Plant Glycan Metabolism

Ecology of marine Bacteroidetes: a comparative genomics approach

(2013) Beatriz Fernández-Gómez et al.   ISME Journal

Bacterial Communities Associated with the Leaves and the Roots of Arabidopsis thaliana

(2013) Natacha Bodenhausen et al.   PLoS One

Genomics and Physiology of a Marine Flavobacterium Encoding a Proteorhodopsin and a Xanthorhodopsin-Like Protein

(2013) Thomas Riedel et al.   PLoS One

The volatile-producing Flavobacterium johnsoniae strain GSE09 shows biocontrol activity against Phytophthora capsici in pepper

(2012) M.K. Sang et al.   JOURNAL OF APPLIED MICROBIOLOGY

Genome Sequence of the Fish Pathogen Flavobacterium columnare ATCC 49512

(2012) H. C. Tekedar et al.   JOURNAL OF BACTERIOLOGY

Complete Genome Sequence of Flavobacterium indicum GPSTA100-9T, Isolated from Warm Spring Water

(2012) P. Barbier et al.   JOURNAL OF BACTERIOLOGY

Twenty-One Genome Sequences from Pseudomonas Species and 19 Genome Sequences from Diverse Bacteria Isolated from the Rhizosphere and Endosphere of Populus deltoides

(2012) S. D. Brown et al.   JOURNAL OF BACTERIOLOGY

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota

(2012) Davide Bulgarelli et al.   NATURE

dbCAN: a web resource for automated carbohydrate-active enzyme annotation

(2012) Yanbin Yin et al.   NUCLEIC ACIDS RESEARCH

Possible Role of Horizontal Gene Transfer in the Colonization of Sea Ice by Algae

(2012) James A. Raymond et al.   PLoS One

SEED Servers: High-Performance Access to the SEED Genomes, Annotations, and Metabolic Models

(2012) Ramy K. Aziz et al.   PLoS One

Comparative Genomics of Plant-Associated Pseudomonas spp.: Insights into Diversity and Inheritance of Traits Involved in Multitrophic Interactions

(2012) Joyce E. Loper et al.   PLoS Genetics

Complete Genome Sequence of the Fish Pathogen Flavobacterium branchiophilum

(2011) Marie Touchon et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genomics of the Proteorhodopsin-Containing Marine Flavobacterium Dokdonia sp. Strain MED134

(2011) José M. González et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Impact of Biochar Application to Soil on the Root-Associated Bacterial Community Structure of Fully Developed Greenhouse Pepper Plants

(2011) Max Kolton et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Hierarchical classification of glycoside hydrolases

(2011) D. G. Naumoff   BIOCHEMISTRY-MOSCOW

Genomic content of uncultured Bacteroidetes from contrasting oceanic provinces in the North Atlantic Ocean

(2011) Paola R. Gómez-Pereira et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial Diversity and Bioprospecting for Cold-Active Hydrolytic Enzymes from Culturable Bacteria Associated with Sediment from Nella Fjord, Eastern Antarctica

(2011) Yong Yu et al.   Marine Drugs

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

MEROPS: the database of proteolytic enzymes, their substrates and inhibitors

(2011) N. D. Rawlings et al.   NUCLEIC ACIDS RESEARCH

Bacterial Niche-Specific Genome Expansion Is Coupled with Highly Frequent Gene Disruptions in Deep-Sea Sediments

(2011) Yong Wang et al.   PLoS One

CAZymes Analysis Toolkit (CAT): Web service for searching and analyzing carbohydrate-active enzymes in a newly sequenced organism using CAZy database

(2010) Byung H Park et al.   GLYCOBIOLOGY

Flavobacterium beibuense sp. nov., isolated from marine sediment

(2010) Y. Fu et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Pyrosequencing Reveals a Highly Diverse and Cultivar-Specific Bacterial Endophyte Community in Potato Roots

(2010) Daniel K. Manter et al.   MICROBIAL ECOLOGY

Induction of Systemic Resistance in Plants by Biochar, a Soil-Applied Carbon Sequestering Agent

(2010) Yigal Elad et al.   PHYTOPATHOLOGY

Biochar impact on development and productivity of pepper and tomato grown in fertigated soilless media

(2010) Ellen R. Graber et al.   PLANT AND SOIL

Beyond the Green: Understanding the Evolutionary Puzzle of Plant and Algal Cell Walls

(2010) Z. A. Popper et al.   PLANT PHYSIOLOGY

Bacterial coldwater disease of fishes caused by Flavobacterium psychrophilum

(2010) Clifford E. Starliper   Journal of Advanced Research

Novel Features of the Polysaccharide-Digesting Gliding Bacterium Flavobacterium johnsoniae as Revealed by Genome Sequence Analysis

(2009) M. J. McBride et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

RAPD analysis of genetic diversity and qualitative assessment of hydrolytic activities in a collection of Bacillus sp. isolate

(2009) Tanja Beric et al.   Archives of Biological Sciences

The  -proteobacteria: the Darwin finches of the bacterial world

(2009) T. J.G. Ettema et al.   Biology Letters

Flavobacterium rivuli sp. nov., Flavobacterium subsaxonicum sp. nov., Flavobacterium swingsii sp. nov. and Flavobacterium reichenbachii sp. nov., isolated from a hard water rivulet

(2009) Z. Ali et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Biological control of Phytophthora blight of pepper by antagonistic rhizobacteria selected from a sequential screening procedure

(2008) Mee Kyung Sang et al.   BIOLOGICAL CONTROL

Flavobacterial Community Structure in a Hardwater Rivulet and Adjacent Forest Soil, Harz Mountain, Germany

(2008) Sylvie Cousin   CURRENT MICROBIOLOGY

Flavobacterium lindanitolerans sp. nov., isolated from hexachlorocyclohexane-contaminated soil

(2008) S. Jit et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

An Improved General Amino Acid Replacement Matrix

(2008) S. Q. Le et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics

(2008) B. L. Cantarel et al.   NUCLEIC ACIDS RESEARCH

Genome analysis of the proteorhodopsin-containing marine bacterium Polaribacter sp. MED152 (Flavobacteria)

(2008) J. M. Gonzalez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nitrogen fixation island and rhizosphere competence traits in the genome of root-associated Pseudomonas stutzeri A1501

(2008) Y. Yan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA