Can Abundance of Protists Be Inferred from Sequence Data: A Case Study of Foraminifera

Revealing the Diversity and Quantity of Peritrich Ciliates in Environmental Samples Using Specific Primer-based PCR and Quantitative PCR

(2012) Xihan Liu et al.   MICROBES AND ENVIRONMENTS

Generation of Multimillion-Sequence 16S rRNA Gene Libraries from Complex Microbial Communities by Assembling Paired-End Illumina Reads

(2011) Andrea K. Bartram et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Estimation of bacterial diversity using next generation sequencing of 16S rDNA: a comparison of different workflows

(2011) Jorge Barriuso et al.   BMC BIOINFORMATICS

Quantitative PCR assay for the detection of the parasitic ciliate Cryptocaryon irritans

(2011) Akito Taniguchi et al.   FISHERIES SCIENCE

Plastid 16S rRNA Gene Diversity among Eukaryotic Picophytoplankton Sorted by Flow Cytometry from the South Pacific Ocean

(2011) Xiao Li Shi et al.   PLoS One

Use of diatom life-forms and ecological guilds to assess pesticide contamination in rivers: Lotic mesocosm approaches

(2010) Frédéric Rimet et al.   ECOLOGICAL INDICATORS

Genome Dynamics Are Influenced by Food Source in Allogromia laticollaris Strain CSH (Foraminifera)

(2010) L. W. Parfrey et al.   Genome Biology and Evolution

Short rDNA Barcodes for Species Identification in Foraminifera

(2010) JAN PAWLOWSKI et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Comparison of benthic foraminifera and macrofaunal indicators of the impact of oil-based drill mud disposal

(2010) Mariéva Denoyelle et al.   MARINE POLLUTION BULLETIN

Contrasting seasonal niche separation between rare and abundant taxa conceals the extent of protist diversity

(2010) VIOLA NOLTE et al.   MOLECULAR ECOLOGY

Quantifying microbial communities with 454 pyrosequencing: does read abundance count?

(2010) ANTHONY S. AMEND et al.   MOLECULAR ECOLOGY

RNA-dependent control of gene amplification

(2010) G. Heyse et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Impact of oil-based drill mud disposal on benthic foraminiferal assemblages on the continental margin off Angola

(2009) F.J. Jorissen et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building

(2009) M. Gouy et al.   MOLECULAR BIOLOGY AND EVOLUTION

Quantification of Diatom and Dinoflagellate Biomasses in Coastal Marine Seawater Samples by Real-Time PCR

(2008) A. Godhe et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Distribution of the uncultured protist MAST-4 in the Indian Ocean, Drake Passage and Mediterranean Sea assessed by real-time quantitative PCR

(2008) Raquel Rodríguez-Martínez et al.   ENVIRONMENTAL MICROBIOLOGY

The Dynamic Nature of Eukaryotic Genomes

(2008) L. W. Parfrey et al.   MOLECULAR BIOLOGY AND EVOLUTION

Comparison of benthic foraminiferal and macrofaunal responses to organic pollution in the Firth of Clyde (Scotland)

(2007) M. Mojtahid et al.   MARINE POLLUTION BULLETIN