Metagenomic Analysis of Viral Communities in (Hado)Pelagic Sediments
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Title
Metagenomic Analysis of Viral Communities in (Hado)Pelagic Sediments
Authors
Keywords
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Journal
PLoS One
Volume 8, Issue 2, Pages e57271
Publisher
Public Library of Science (PLoS)
Online
2013-02-28
DOI
10.1371/journal.pone.0057271
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Note: Only part of the references are listed.- Evaluation of methods to concentrate and purify ocean virus communities through comparative, replicated metagenomics
- (2012) Bonnie L. Hurwitz et al. ENVIRONMENTAL MICROBIOLOGY
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- (2011) Yuji Tomaru et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
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- (2011) Karin Holmfeldt et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
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- (2011) Y Tomaru et al. AQUATIC MICROBIAL ECOLOGY
- Viral abundance and activity in the deep sub-seafloor biosphere
- (2011) M Middelboe et al. AQUATIC MICROBIAL ECOLOGY
- Metavir: a web server dedicated to virome analysis
- (2011) Simon Roux et al. BIOINFORMATICS
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- (2011) Huiquan Liu et al. BMC EVOLUTIONARY BIOLOGY
- Integrative analysis of environmental sequences using MEGAN4
- (2011) D. H. Huson et al. GENOME RESEARCH
- The human gut virome: Inter-individual variation and dynamic response to diet
- (2011) S. Minot et al. GENOME RESEARCH
- MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
- (2011) K. Tamura et al. MOLECULAR BIOLOGY AND EVOLUTION
- Gene prediction with Glimmer for metagenomic sequences augmented by classification and clustering
- (2011) David R. Kelley et al. NUCLEIC ACIDS RESEARCH
- Broad Surveys of DNA Viral Diversity Obtained through Viral Metagenomics of Mosquitoes
- (2011) Terry Fei Fan Ng et al. PLoS One
- Virophage control of antarctic algal host-virus dynamics
- (2011) S. Yau et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Single-Cell Genomics Reveals Organismal Interactions in Uncultivated Marine Protists
- (2011) H. S. Yoon et al. SCIENCE
- Recombination in Eukaryotic Single Stranded DNA Viruses
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- Hydroxyapatite-Mediated Separation of Double-Stranded DNA, Single-Stranded DNA, and RNA Genomes from Natural Viral Assemblages
- (2010) C. Andrews-Pfannkoch et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Metagenomic Analysis of the Viral Communities in Fermented Foods
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- Diversity and distribution of single-stranded DNA phages in the North Atlantic Ocean
- (2010) Kimberly P Tucker et al. ISME Journal
- Viral and microbial community dynamics in four aquatic environments
- (2010) Beltran Rodriguez-Brito et al. ISME Journal
- The ABISMO Mud and Water Sampling ROV for Surveys at 11,000 m Depth
- (2010) Hiroshi Yoshida et al. MARINE TECHNOLOGY SOCIETY JOURNAL
- Real-Time PCR Detection of Host-Mediated Cyanophage Gene Transcripts during Infection of a Natural Microcystis aeruginosa Population
- (2010) Mitsuhiro Yoshida et al. MICROBES AND ENVIRONMENTS
- Ab initio gene identification in metagenomic sequences
- (2010) Wenhan Zhu et al. NUCLEIC ACIDS RESEARCH
- Microbial Provinces in the Subseafloor
- (2009) Matthew O. Schrenk et al. Annual Review of Marine Science
- Current insights into phage biodiversity and biogeography
- (2009) Rebecca Vega Thurber CURRENT OPINION IN MICROBIOLOGY
- Metagenomic analysis of viruses in reclaimed water
- (2009) Karyna Rosario et al. ENVIRONMENTAL MICROBIOLOGY
- The genome and structural proteome of an ocean siphovirus: a new window into the cyanobacterial ‘mobilome’
- (2009) Matthew B. Sullivan et al. ENVIRONMENTAL MICROBIOLOGY
- Discriminative detection and enumeration of microbial life in marine subsurface sediments
- (2009) Yuki Morono et al. ISME Journal
- Diverse circovirus-like genome architectures revealed by environmental metagenomics
- (2009) K. Rosario et al. JOURNAL OF GENERAL VIROLOGY
- Metagenomic Analysis of Respiratory Tract DNA Viral Communities in Cystic Fibrosis and Non-Cystic Fibrosis Individuals
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- High Diversity of the Viral Community from an Antarctic Lake
- (2009) A. Lopez-Bueno et al. SCIENCE
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- (2008) M. Yoshida et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Amplification of Uncultured Single-Stranded DNA Viruses from Rice Paddy Soil
- (2008) K.-H. Kim et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Recent developments in the MAFFT multiple sequence alignment program
- (2008) K. Katoh et al. BRIEFINGS IN BIOINFORMATICS
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- (2008) Christelle Desnues et al. NATURE
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- (2007) Y Tomaru et al. AQUATIC MICROBIAL ECOLOGY
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