Using Phylogenetic and Coalescent Methods to Understand the Species Diversity in the Cladia aggregata Complex (Ascomycota, Lecanorales)

New combinations in the genus Cladia

(2012) Sittiporn Parnmen et al.   LICHENOLOGIST

Geographical and seasonal evidence of cryptic diversity in the Baetis rhodani complex (Ephemeroptera, Baetidae) revealed by means of DNA taxonomy

(2011) Livia Lucentini et al.   HYDROBIOLOGIA

Phylogeny of the genus Bryoria

(2011) Leena MYLLYS et al.   LICHENOLOGIST

Parmelia sulcata (Ascomycota: Parmeliaceae), a sympatric monophyletic species complex

(2011) Maria del Carmen MOLINA et al.   LICHENOLOGIST

Species delimitations in the Cladonia cariosa group (Cladoniaceae, Ascomycota)

(2011) Raquel PINO-BODAS et al.   LICHENOLOGIST

Population structure of mycobionts and photobionts of the widespread lichen Cetraria aculeata

(2011) F. FERNÁNDEZ-MENDOZA et al.   MOLECULAR ECOLOGY

Species delimitation in taxonomically difficult lichen-forming fungi: An example from morphologically and chemically diverse Xanthoparmelia (Parmeliaceae) in North America

(2011) Steven D. Leavitt et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

A phylogenetic analysis of the boreal lichen Mycoblastus sanguinarius (Mycoblastaceae, lichenized Ascomycota) reveals cryptic clades correlated with fatty acid profiles

(2011) Toby Spribille et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Complex patterns of speciation in cosmopolitan “rock posy” lichens – Discovering and delimiting cryptic fungal species in the lichen-forming Rhizoplaca melanophthalma species-complex (Lecanoraceae, Ascomycota)

(2011) Steven D. Leavitt et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Deep mtDNA subdivision within Linnean species in an endemic radiation of tiger beetles from New Zealand (genus Neocicindela)

(2011) Joan Pons et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Using haplotype networks, estimation of gene flow and phenotypic characters to understand species delimitation in fungi of a predominantly Antarctic Usnea group (Ascomycota, Parmeliaceae)

(2011) Nora Wirtz et al.   ORGANISMS DIVERSITY & EVOLUTION

Another example of cryptic diversity in lichen-forming fungi: the new species Parmelia mayi (Ascomycota: Parmeliaceae)

(2011) M. Carmen Molina et al.   ORGANISMS DIVERSITY & EVOLUTION

Phenotypical plasticity and homoplasy complicate species delimitation in the Cladonia gracilis group (Cladoniaceae, Ascomycota)

(2011) Raquel Pino-Bodas et al.   ORGANISMS DIVERSITY & EVOLUTION

Integrating DNA and morphological taxonomy to describe diversity in poorly studied microscopic animals: new species of the genus Abrochtha Bryce, 1910 (Rotifera: Bdelloidea: Philodinavidae)

(2011) C. WILLIAM BIRKY JR et al.   ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Cryptic species in lichen-forming fungi

(2011) Ana Crespo et al.   IMA Fungus

Phylogeography and divergence date estimates of a lichen species complex with a disjunct distribution pattern

(2010) Mónica A. G. Otálora et al.   AMERICAN JOURNAL OF BOTANY

Cryptic species and species pairs in lichens: A discussion on the relationship between molecular phylogenies and morphological characters

(2010) Ana Crespo et al.   ANALES DEL JARDIN BOTANICO DE MADRID

Diversity of Lecidea (Lecideaceae, Ascomycota) species revealed by molecular data and morphological characters

(2010) Ulrike Ruprecht et al.   ANTARCTIC SCIENCE

Phenotypic disparity and adaptive radiation in the genusCladia(Lecanorales, Ascomycota)

(2010) H. Thorsten Lumbsch et al.   AUSTRALIAN SYSTEMATIC BOTANY

Revisiting the taxonomy of the Rattini tribe: a phylogeny-based delimitation of species boundaries

(2010) Marie Pagès et al.   BMC EVOLUTIONARY BIOLOGY

Molecular phylogenetic studies reveal an undescribed species within the North American concept of Melanelixia glabra (Parmeliaceae)

(2010) Pradeep K. Divakar et al.   FUNGAL DIVERSITY

Cryptic diversity in the genus Adineta Hudson & Gosse, 1886 (Rotifera: Bdelloidea: Adinetidae): a DNA taxonomy approach

(2010) Diego Fontaneto et al.   HYDROBIOLOGIA

DNA-based association of adults and larvae in Baetidae (Ephemeroptera) with the description of a new genus Adnoptilum in Madagascar

(2010) Jean-Luc Gattolliat et al.   JOURNAL OF THE NORTH AMERICAN BENTHOLOGICAL SOCIETY

New insights into diversity and evolution of deep-sea Mytilidae (Mollusca: Bivalvia)

(2010) Julien Lorion et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Epidemic disease decimates amphibian abundance, species diversity, and evolutionary history in the highlands of central Panama

(2010) A. J. Crawford et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Species Delimitation Using a Combined Coalescent and Information-Theoretic Approach: An Example from North American Myotis Bats

(2010) Bryan C. Carstens et al.   SYSTEMATIC BIOLOGY

An integrative taxonomic revision of the Cape Verdean skinks (Squamata, Scincidae)

(2010) Aurélien Miralles et al.   ZOOLOGICA SCRIPTA

STEM: species tree estimation using maximum likelihood for gene trees under coalescence

(2009) Laura S. Kubatko et al.   BIOINFORMATICS

Hypogymnia minilobata (Parmeliaceae), a new lichen from coastal California

(2009) Bruce McCune et al.   BRYOLOGIST

Assessing clonality and chemotype monophyly in Thamnolia (Icmadophilaceae)

(2009) Matthew P. Nelsen et al.   BRYOLOGIST

Species delimitation and evolution of metal bioaccumulation in the lichenizedAcarospora smaragdula(Ascomycota, Fungi) complex

(2009) Mats Wedin et al.   CLADISTICS

Molecular data show that Bryoria fremontii and B. tortuosa ( Parmeliaceae) are conspecific

(2009) Saara VELMALA et al.   LICHENOLOGIST

The taxonomy of the Caloplaca citrina group ( Teloschistaceae) in the Black Sea region; with contributions to the cryptic species concept in lichenology

(2009) Jan VONDRÁK et al.   LICHENOLOGIST

Bayesian Inference of Species Trees from Multilocus Data

(2009) J. Heled et al.   MOLECULAR BIOLOGY AND EVOLUTION

Extreme levels of hidden diversity in microscopic animals (Rotifera) revealed by DNA taxonomy

(2009) Diego Fontaneto et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

New primers for promising single-copy genes in fungal phylogenetics and systematics

(2009) I. Schmitt et al.   PERSOONIA

Accelerated Species Inventory on Madagascar Using Coalescent-Based Models of Species Delineation

(2009) Michael T. Monaghan et al.   SYSTEMATIC BIOLOGY

Triterpene chemosyndromes and subtle morphological characters characterise lineages in thePhyscia aipoliagroup in Australia (Ascomycota)

(2009) John A. Elix et al.   SYSTEMATICS AND BIODIVERSITY

Species recognition and phylogeny ofThelotremaspecies in Australia (Ostropales, Ascomycota)

(2008) H. Thorsten Lumbsch et al.   AUSTRALIAN SYSTEMATIC BOTANY

A Rapid Bootstrap Algorithm for the RAxML Web Servers

(2008) Alexandros Stamatakis et al.   SYSTEMATIC BIOLOGY

Phylogenetic patterns of morphological and chemical characters and reproductive mode in theHeterodermia obscuratagroup in Costa Rica (Ascomycota, Physciaceae)

(2008) Robert Lücking et al.   SYSTEMATICS AND BIODIVERSITY

The delimitation of Antarctic and bipolar species of neuropogonoid Usnea (Ascomycota, Lecanorales): a cohesion approach of species recognition for the Usnea perpusilla complex

(2007) Nora Wirtz et al.