Analyzing Illumina Gene Expression Microarray Data from Different Tissues: Methodological Aspects of Data Analysis in the MetaXpress Consortium

Unraveling the Regulatory Mechanisms Underlying Tissue-Dependent Genetic Variation of Gene Expression

(2012) Jingyuan Fu et al.   PLoS Genetics

Statistical Test of Expression Pattern (STEPath): a new strategy to integrate gene expression data with genomic information in individual and meta-analysis studies

(2011) Paolo Martini et al.   BMC BIOINFORMATICS

Meta-analysis of microarray data using a pathway-based approach identifies a 37-gene expression signature for systemic lupus erythematosus in human peripheral blood mononuclear cells

(2011) Dhivya Arasappan et al.   BMC Medicine

Meta-analysis of Clear Cell Renal Cell Carcinoma Gene Expression Defines a Variant Subgroup and Identifies Gender Influences on Tumor Biology

(2011) A. Rose Brannon et al.   EUROPEAN UROLOGY

Meta-analysis of gene expression profiles associated with histological classification and survival in 829 ovarian cancer samples

(2011) Tibor Fekete et al.   INTERNATIONAL JOURNAL OF CANCER

Meta-analysis of microarray gene expression studies on intracranial aneurysms

(2011) C. Roder et al.   NEUROSCIENCE

The UCSC Genome Browser database: extensions and updates 2011

(2011) T. R. Dreszer et al.   NUCLEIC ACIDS RESEARCH

Investigation of Variation in Gene Expression Profiling of Human Blood by Extended Principle Component Analysis

(2011) Qinghua Xu et al.   PLoS One

Trans-eQTLs Reveal That Independent Genetic Variants Associated with a Complex Phenotype Converge on Intermediate Genes, with a Major Role for the HLA

(2011) Rudolf S. N. Fehrmann et al.   PLoS Genetics

Comparison study of microarray meta-analysis methods

(2010) Anna Campain et al.   BMC BIOINFORMATICS

Comparison of normalization methods for Illumina BeadChip HumanHT-12 v3

(2010) Ramona Schmid et al.   BMC GENOMICS

Distribution and Categorization of Left Ventricular Measurements in the General Population

(2010) Philipp S. Wild et al.   Circulation-Cardiovascular Imaging

Cohort Profile: The Study of Health in Pomerania

(2010) H. Volzke et al.   INTERNATIONAL JOURNAL OF EPIDEMIOLOGY

A trans-acting locus regulates an anti-viral expression network and type 1 diabetes risk

(2010) Matthias Heinig et al.   NATURE

Integrative Meta-Analysis of Differential Gene Expression in Acute Myeloid Leukemia

(2010) Brady G. Miller et al.   PLoS One

Genetics and Beyond – The Transcriptome of Human Monocytes and Disease Susceptibility

(2010) Tanja Zeller et al.   PLoS One

Incidence of Type 2 diabetes in the elderly German population and the effect of clinical and lifestyle risk factors: KORA S4/F4 cohort study

(2009) W. Rathmann et al.   DIABETIC MEDICINE

A re-annotation pipeline for Illumina BeadArrays: improving the interpretation of gene expression data

(2009) Nuno L. Barbosa-Morais et al.   NUCLEIC ACIDS RESEARCH

Eigen-R2 for dissecting variation in high-dimensional studies

(2008) Lin S. Chen et al.   BIOINFORMATICS

lumi: a pipeline for processing Illumina microarray

(2008) P. Du et al.   BIOINFORMATICS

Meta-analysis of gene expression profiles related to relapse-free survival in 1,079 breast cancer patients

(2008) Balazs Györffy et al.   BREAST CANCER RESEARCH AND TREATMENT

GEMS (Gene Expression Metasignatures), a Web Resource for Querying Meta-analysis of Expression Microarray Datasets: 17 -Estradiol in MCF-7 Cells

(2008) S. A. Ochsner et al.   CANCER RESEARCH

Model-based variance-stabilizing transformation for Illumina microarray data

(2008) Simon M. Lin et al.   NUCLEIC ACIDS RESEARCH

Key Issues in Conducting a Meta-Analysis of Gene Expression Microarray Datasets

(2008) Adaikalavan Ramasamy et al.   PLOS MEDICINE