A Meta-Analysis Reveals the Commonalities and Differences in Arabidopsis thaliana Response to Different Viral Pathogens

When the human viral infectome and diseasome networks collide: towards a systems biology platform for the aetiology of human diseases

(2011) Vincent Navratil et al.   BMC Systems Biology

A systems biology approach to the evolution of plant–virus interactions

(2011) Santiago F Elena et al.   CURRENT OPINION IN PLANT BIOLOGY

Evidence for Network Evolution in an Arabidopsis Interactome Map

(2011) et al.   SCIENCE

Independently Evolved Virulence Effectors Converge onto Hubs in a Plant Immune System Network

(2011) M. S. Mukhtar et al.   SCIENCE

Plant immunity: towards an integrated view of plant–pathogen interactions

(2010) Peter N. Dodds et al.   NATURE REVIEWS GENETICS

From ‘differential expression’ to ‘differential networking’ – identification of dysfunctional regulatory networks in diseases

(2010) Alberto de la Fuente   TRENDS IN GENETICS

Patterns of HIV-1 Protein Interaction Identify Perturbed Host-Cellular Subsystems

(2010) Jamie I. MacPherson et al.   PLoS Computational Biology

A Physical and Regulatory Map of Host-Influenza Interactions Reveals Pathways in H1N1 Infection

(2009) Sagi D. Shapira et al.   CELL

Virus–host interactions: from systems biology to translational research

(2009) Xinxia Peng et al.   CURRENT OPINION IN MICROBIOLOGY

Connecting viral with cellular interactomes

(2009) SM Bailer et al.   CURRENT OPINION IN MICROBIOLOGY

Evolution of biomolecular networks — lessons from metabolic and protein interactions

(2009) Takuji Yamada et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Protein–protein interactions in two potyviruses using the yeast two-hybrid system

(2009) Lin Lin et al.   VIRUS RESEARCH

Reverse-engineering the Arabidopsis thaliana transcriptional network under changing environmental conditions

(2009) Javier Carrera et al.   GENOME BIOLOGY

Altered gene expression changes in Arabidopsis leaf tissues and protoplasts in response to Plum pox virus infection

(2008) Mohan Babu et al.   BMC GENOMICS

Virogenomics: the virus–host interaction revisited

(2008) Arno C Andeweg et al.   CURRENT OPINION IN MICROBIOLOGY

Hepatitis C virus infection protein network

(2008) B de Chassey et al.   Molecular Systems Biology

Teasing out the missing links

(2008) Sid Redner   NATURE

GEPAS, a web-based tool for microarray data analysis and interpretation

(2008) J. Tarraga et al.   NUCLEIC ACIDS RESEARCH

Global Analysis of Arabidopsis Gene Expression Uncovers a Complex Array of Changes Impacting Pathogen Response and Cell Cycle during Geminivirus Infection

(2008) J. T. Ascencio-Ibanez et al.   PLANT PHYSIOLOGY

Virus Adaptation by Manipulation of Host's Gene Expression

(2008) Patricia Agudelo-Romero et al.   PLoS One

Network ‘Small-World-Ness’: A Quantitative Method for Determining Canonical Network Equivalence

(2008) Mark D. Humphries et al.   PLoS One

The Landscape of Human Proteins Interacting with Viruses and Other Pathogens

(2008) Matthew D. Dyer et al.   PLoS Pathogens

High-Quality Binary Protein Interaction Map of the Yeast Interactome Network

(2008) H. Yu et al.   SCIENCE

Changes in the gene expression profile of Arabidopsis thaliana after infection with Tobacco etch virus

(2008) Patricia Agudelo-Romero et al.   Virology Journal

Host Responses in Life-History Traits and Tolerance to Virus Infection in Arabidopsis thaliana

(2008) Israel Pagán et al.   PLoS Pathogens