Pyrosequencing of Bacterial Symbionts within Axinella corrugata Sponges: Diversity and Seasonal Variability

PrimerProspector: de novo design and taxonomic analysis of barcoded polymerase chain reaction primers

(2011) William A. Walters et al.   BIOINFORMATICS

CloVR: A virtual machine for automated and portable sequence analysis from the desktop using cloud computing

(2011) Samuel V Angiuoli et al.   BMC BIOINFORMATICS

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Deep-Sea Oil Plume Enriches Indigenous Oil-Degrading Bacteria

(2010) Terry C. Hazen et al.   SCIENCE

Florida reef sponges harbor coral disease-associated microbes

(2010) Karita Negandhi et al.   SYMBIOSIS

Presence of Pathogens and Indicator Microbes at a Non-Point Source Subtropical Recreational Marine Beach

(2009) A. M. Abdelzaher et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Widespread Distribution of Poribacteria in Demospongiae

(2009) F. F. Lafi et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Complex nitrogen cycling in the spongeGeodia barretti

(2009) Friederike Hoffmann et al.   ENVIRONMENTAL MICROBIOLOGY

KING (Kinemage, Next Generation): A versatile interactive molecular and scientific visualization program

(2009) Vincent B. Chen et al.   PROTEIN SCIENCE

Statistical Methods for Detecting Differentially Abundant Features in Clinical Metagenomic Samples

(2009) James Robert White et al.   PLoS Computational Biology

Cross-Kingdom Amplification Using Bacteria-Specific Primers: Complications for Studies of Coral Microbial Ecology

(2008) J. P. Galkiewicz et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diversity and expression of nitrogen fixation genes in bacterial symbionts of marine sponges

(2008) Naglaa M. Mohamed et al.   ENVIRONMENTAL MICROBIOLOGY

What do we really know about sponge-microbial symbioses?

(2008) Nicole S Webster et al.   ISME Journal

A core gut microbiome in obese and lean twins

(2008) Peter J. Turnbaugh et al.   NATURE