A Coarse-Grained Approach to Protein Design: Learning from Design to Understand Folding

Accounting for Protein-Solvent Contacts Facilitates Design of Nonaggregating Lattice Proteins

(2011) Sanne Abeln et al.   BIOPHYSICAL JOURNAL

Pair potentials for protein folding: Choice of reference states and sensitivity of predicted native states to variations in the interaction schemes

(2010) Marcos R. Betancourt et al.   PROTEIN SCIENCE

First-principles design of nanomachines

(2009) J. R. Banavar et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Macromolecular Modeling with Rosetta

(2008) Rhiju Das et al.   Annual Review of Biochemistry

Kemp elimination catalysts by computational enzyme design

(2008) Daniela Röthlisberger et al.   NATURE

Maximum Entropy Approach for Deducing Amino Acid Interactions in Proteins

(2008) Flavio Seno et al.   PHYSICAL REVIEW LETTERS