MIRTFnet: Analysis of miRNA Regulated Transcription Factors

TF-centered downstream gene set enrichment analysis: Inference of causal regulators by integrating TF-DNA interactions and protein post-translational modifications information

(2011) Qi Liu et al.   BMC BIOINFORMATICS

MicroRNAs Differentially Expressed in Postnatal Aortic Development Downregulate Elastin via 3′ UTR and Coding-Sequence Binding Sites

(2011) Claus Eric Ott et al.   PLoS One

microRNA and Cancer

(2010) Mengfeng Li et al.   AAPS Journal

miRSel: Automated extraction of associations between microRNAs and genes from the biomedical literature

(2010) Haroon Naeem et al.   BMC BIOINFORMATICS

Microrna let-7: an emerging next-generation cancer therapeutic

(2010) D. Barh et al.   Current Oncology

Transcription factor regulation can be accurately predicted from the presence of target gene signatures in microarray gene expression data

(2010) Ahmed Essaghir et al.   NUCLEIC ACIDS RESEARCH

Identification of microRNA activity by Targets' Reverse EXpression

(2009) Stefano Volinia et al.   BIOINFORMATICS

Stabilization of N-Myc Is a Critical Function of Aurora A in Human Neuroblastoma

(2009) Tobias Otto et al.   CANCER CELL

MicroRNAs: Target Recognition and Regulatory Functions

(2009) David P. Bartel   CELL

The miR-34 family in cancer and apoptosis

(2009) H Hermeking   CELL DEATH AND DIFFERENTIATION

The role of let-7 in cell differentiation and cancer

(2009) Benjamin Boyerinas et al.   ENDOCRINE-RELATED CANCER

MicroRNA-122 Inhibits Tumorigenic Properties of Hepatocellular Carcinoma Cells and Sensitizes These Cells to Sorafenib

(2009) Shoumei Bai et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Modulation of microRNA processing by p53

(2009) Hiroshi I. Suzuki et al.   NATURE

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Revisiting the principles of microRNA target recognition and mode of action

(2009) Peter Brodersen et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

miRGen 2.0: a database of microRNA genomic information and regulation

(2009) Panagiotis Alexiou et al.   NUCLEIC ACIDS RESEARCH

Combinatorial network of primary and secondary microRNA-driven regulatory mechanisms

(2009) Kang Tu et al.   NUCLEIC ACIDS RESEARCH

Identification of Conserved Regulatory Elements in Mammalian Promoter Regions: A Case Study Using the PCK1 Promoter

(2009) George E. Liu et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Coordinated Regulation of Cell Cycle Transcripts by p53-Inducible microRNAs, miR-192 and miR-215

(2008) S. A. Georges et al.   CANCER RESEARCH

p53-Responsive MicroRNAs 192 and 215 Are Capable of Inducing Cell Cycle Arrest

(2008) C. J. Braun et al.   CANCER RESEARCH

Control of protein synthesis and mRNA degradation by microRNAs

(2008) Jidong Liu   CURRENT OPINION IN CELL BIOLOGY

Most mammalian mRNAs are conserved targets of microRNAs

(2008) R. C. Friedman et al.   GENOME RESEARCH

The impact of microRNAs on protein output

(2008) Daehyun Baek et al.   NATURE

Widespread changes in protein synthesis induced by microRNAs

(2008) Matthias Selbach et al.   NATURE

miR-16 family induces cell cycle arrest by regulating multiple cell cycle genes

(2008) Q. Liu et al.   NUCLEIC ACIDS RESEARCH

Human Protein Reference Database--2009 update

(2008) T. S. Keshava Prasad et al.   NUCLEIC ACIDS RESEARCH

The database of experimentally supported targets: a functional update of TarBase

(2008) G. L. Papadopoulos et al.   NUCLEIC ACIDS RESEARCH

miRecords: an integrated resource for microRNA-target interactions

(2008) F. Xiao et al.   NUCLEIC ACIDS RESEARCH

STRING 8--a global view on proteins and their functional interactions in 630 organisms

(2008) L. J. Jensen et al.   NUCLEIC ACIDS RESEARCH

miR2Disease: a manually curated database for microRNA deregulation in human disease

(2008) Q. Jiang et al.   NUCLEIC ACIDS RESEARCH

The MYCN oncogene is a direct target of miR-34a

(2008) J S Wei et al.   ONCOGENE

PU.1 binding to the p53 family of tumor suppressors impairs their transcriptional activity

(2008) M P Tschan et al.   ONCOGENE

Inferring MicroRNA Activities by Combining Gene Expression with MicroRNA Target Prediction

(2008) Chao Cheng et al.   PLoS One

A regulatory interplay between miR-27a and Runx1 during megakaryopoiesis

(2008) O. Ben-Ami et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Gene Regulation by Transcription Factors and MicroRNAs

(2008) O. Hobert   SCIENCE

Tight Regulation of Unstructured Proteins: From Transcript Synthesis to Protein Degradation

(2008) J. Gsponer et al.   SCIENCE

MicroRNAs: Control and Loss of Control in Human Physiology and Disease

(2008) Min Li et al.   WORLD JOURNAL OF SURGERY

Individual mRNA expression profiles reveal the effects of specific microRNAs

(2008) Amit Arora et al.   GENOME BIOLOGY