The Light Responsive Transcriptome of the Zebrafish: Function and Regulation

A Common Origin: Signaling Similarities in the Regulation of the Circadian Clock and DNA Damage Responses

(2010) Yoshimi Uchida et al.   BIOLOGICAL & PHARMACEUTICAL BULLETIN

SnapShot: Nucleotide Excision Repair

(2010) Caixia Guo et al.   CELL

Common light signaling pathways controlling DNA repair and circadian clock entrainment in zebrafish

(2010) Jun Hirayama et al.   CELL CYCLE

MULTIPLE PAR AND E4BP4 bZIP TRANSCRIPTION FACTORS IN ZEBRAFISH: DIVERSE SPATIAL AND TEMPORAL EXPRESSION PATTERNS

(2010) Zohar Ben-Moshe et al.   CHRONOBIOLOGY INTERNATIONAL

Reactive oxygen species, cellular redox systems, and apoptosis

(2010) Magdalena L. Circu et al.   FREE RADICAL BIOLOGY AND MEDICINE

Using Trawler_standalone to discover overrepresented motifs in DNA and RNA sequences derived from various experiments including chromatin immunoprecipitation

(2010) Yannick Haudry et al.   Nature Protocols

Thyrotroph Embryonic Factor Regulates Light-Induced Transcription of Repair Genes in Zebrafish Embryonic Cells

(2010) Daria Gavriouchkina et al.   PLoS One

ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks

(2009) Gabriela Bindea et al.   BIOINFORMATICS

BioMart – biological queries made easy

(2009) Damian Smedley et al.   BMC GENOMICS

The 2008 Pittendrigh/Aschoff Lecture: Peripheral Phase Coordination in the Mammalian Circadian Timing System

(2009) Ueli Schibler   JOURNAL OF BIOLOGICAL RHYTHMS

LitInspector: literature and signal transduction pathway mining in PubMed abstracts

(2009) Matthias Frisch et al.   NUCLEIC ACIDS RESEARCH

The evolution of irradiance detection: melanopsin and the non-visual opsins

(2009) S. N. Peirson et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Post-translational modifications in circadian rhythms

(2009) Arun Mehra et al.   TRENDS IN BIOCHEMICAL SCIENCES

Light Directs Zebrafish period2 Expression via Conserved D and E Boxes

(2009) Gad Vatine et al.   PLOS BIOLOGY

Functional mechanics of the ATP-dependent Lon protease- lessons from endogenous protein and synthetic peptide substrates

(2008) Irene Lee et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Base excision DNA repair

(2008) D. O. Zharkov   CELLULAR AND MOLECULAR LIFE SCIENCES

Toxicology of the retina: advances in understanding the defence mechanisms and pathogenesis of drug- and light-induced retinopathy

(2008) Timothy L Siu et al.   CLINICAL AND EXPERIMENTAL OPHTHALMOLOGY

Autonomous onset of the circadian clock in the zebrafish embryo

(2008) Marcus P S Dekens et al.   EMBO JOURNAL

Differential display of DNA-binding proteins reveals heat-shock factor 1 as a circadian transcription factor

(2008) H. Reinke et al.   GENES & DEVELOPMENT

Glucocorticoids and the circadian clock

(2008) Thomas Dickmeis   JOURNAL OF ENDOCRINOLOGY

Supreme EnLIGHTenment: Damage Recognition and Signaling in the Mammalian UV Response

(2008) Peter Herrlich et al.   MOLECULAR CELL

Nuclear Hormone Receptors for Heme: REV-ERBα and REV-ERBβ Are Ligand-Regulated Components of the Mammalian Clock

(2008) Thomas P. Burris   MOLECULAR ENDOCRINOLOGY

The genetics of mammalian circadian order and disorder: implications for physiology and disease

(2008) Joseph S. Takahashi et al.   NATURE REVIEWS GENETICS