Standard Biological Parts Knowledgebase

BioNetCAD: design, simulation and experimental validation of synthetic biochemical networks

(2010) Stéphanie Rialle et al.   BIOINFORMATICS

Standard virtual biological parts: a repository of modular modeling components for synthetic biology

(2010) M. T. Cooling et al.   BIOINFORMATICS

SynBioSS designer: a web-based tool for the automated generation of kinetic models for synthetic biological constructs

(2010) E. Weeding et al.   BRIEFINGS IN BIOINFORMATICS

Programming cells: towards an automated ‘Genetic Compiler’

(2010) Kevin Clancy et al.   CURRENT OPINION IN BIOTECHNOLOGY

Synthetic Biology: Tools to Design, Build, and Optimize Cellular Processes

(2010) Eric Young et al.   JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY

Microbial production of fatty-acid-derived fuels and chemicals from plant biomass

(2010) Eric J. Steen et al.   NATURE

GenoCAD for iGEM: a grammatical approach to the design of standard-compliant constructs

(2010) Yizhi Cai et al.   NUCLEIC ACIDS RESEARCH

Creation of a Bacterial Cell Controlled by a Chemically Synthesized Genome

(2010) D. G. Gibson et al.   SCIENCE

Novel approaches to biosensors for detection of arsenic in drinking water

(2009) N. Joshi et al.   DESALINATION

Synthesis of Methyl Halides from Biomass Using Engineered Microbes

(2009) Travis S. Bayer et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

A tunable synthetic mammalian oscillator

(2009) Marcel Tigges et al.   NATURE

Enzymatic assembly of DNA molecules up to several hundred kilobases

(2009) Daniel G Gibson et al.   NATURE METHODS

The second wave of synthetic biology: from modules to systems

(2009) Priscilla E. M. Purnick et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Modeling Structure-Function Relationships in Synthetic DNA Sequences using Attribute Grammars

(2009) Yizhi Cai et al.   PLoS Computational Biology

Measuring the activity of BioBrick promoters using an in vivo reference standard

(2009) Jason R Kelly et al.   Journal of Biological Engineering

TinkerCell: modular CAD tool for synthetic biology

(2009) Deepak Chandran et al.   Journal of Biological Engineering

Synthetic Biology for Synthetic Chemistry

(2008) Jay D. Keasling   ACS Chemical Biology

SynBioSS: the synthetic biology modeling suite

(2008) Anthony D. Hill et al.   BIOINFORMATICS

An ontology-driven semantic mashup of gene and biological pathway information: Application to the domain of nicotine dependence

(2008) Satya S. Sahoo et al.   JOURNAL OF BIOMEDICAL INFORMATICS

Refinement and standardization of synthetic biological parts and devices

(2008) Barry Canton et al.   NATURE BIOTECHNOLOGY

Targeted Development of Registries of Biological Parts

(2008) Jean Peccoud et al.   PLoS One

Genetic design: rising above the sequence

(2008) Jonathan A. Goler et al.   TRENDS IN BIOTECHNOLOGY

Engineering BioBrick vectors from BioBrick parts

(2008) Reshma P Shetty et al.   Journal of Biological Engineering