A Complete Set of Nascent Transcription Rates for Yeast Genes

Evidence that Transcript Cleavage Is Essential for RNA Polymerase II Transcription and Cell Viability

(2010) Stefan Sigurdsson et al.   MOLECULAR CELL

The distribution of active RNA polymerase II along the transcribed region is gene-specific and controlled by elongation factors

(2010) Alfonso Rodríguez-Gil et al.   NUCLEIC ACIDS RESEARCH

There is a steady-state transcriptome in exponentially growing yeast cells

(2010) Vicent Pelechano et al.   YEAST

Most “Dark Matter” Transcripts Are Associated With Known Genes

(2010) Harm van Bakel et al.   PLOS BIOLOGY

Genome-Wide Views of Chromatin Structure

(2009) Oliver J. Rando et al.   Annual Review of Biochemistry

A canonical promoter organization of the transcription machinery and its regulators in the Saccharomyces genome

(2009) B. J. Venters et al.   GENOME RESEARCH

NuA4 Lysine Acetyltransferase Esa1 Is Targeted to Coding Regions and Stimulates Transcription Elongation with Gcn5

(2009) D. S. Ginsburg et al.   MOLECULAR AND CELLULAR BIOLOGY

Interaction of Transcriptional Regulators with Specific Nucleosomes across the Saccharomyces Genome

(2009) R. Thomas Koerber et al.   MOLECULAR CELL

Bidirectional promoters generate pervasive transcription in yeast

(2009) Zhenyu Xu et al.   NATURE

Rates of in situ transcription and splicing in large human genes

(2009) Jarnail Singh et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Specific and global regulation of mRNA stability during osmotic stress in Saccharomyces cerevisiae

(2009) L. Romero-Santacreu et al.   RNA

Regulon-Specific Control of Transcription Elongation across the Yeast Genome

(2009) Vicent Pelechano et al.   PLoS Genetics

Transcription factories

(2008) David R.F. Carter et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Absolute quantification of the budding yeast transcriptome by means of competitive PCR between genomic and complementary DNAs

(2008) Fumihito Miura et al.   BMC GENOMICS

Genome-associated RNA Polymerase II Includes the Dissociable Rpb4/7 Subcomplex

(2008) Anna J. Jasiak et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Comprehensive Transcriptional Analysis of the Oxidative Response in Yeast

(2008) María Micaela Molina-Navarro et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Single-RNA counting reveals alternative modes of gene expression in yeast

(2008) Daniel Zenklusen et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Regulation of TATA-binding protein dynamics in living yeast cells

(2008) R. O. Sprouse et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing

(2008) U. Nagalakshmi et al.   SCIENCE

Nascent RNA Sequencing Reveals Widespread Pausing and Divergent Initiation at Human Promoters

(2008) Leighton J. Core et al.   SCIENCE